Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc273136g00004 ATGGGAAATGCGGTGATTAATGATGTTACAGATATGAGTGGCCTAATTGATTATGCTTGGAGCCATGCCATAATCTCAGATGAAGTGTACAATGGAATTAACAAAAACTGTGACTTTGGTAAAGAAAATCAAACAAAGGCTTGTGATGTTAATGTTGAAGGACTACTTAAATCTTACAACGAAATTGACATATATAGCATTTACTCACCTATTTGCCTCAACAAATATCACCATACACATACATCACTTTCAACCAAACTTCTTGTTGCTCCTCGTCTTCTCACACGCCATGACCTGTGGCATAGTCTACCATCTGGGTACGATCCATGTACAGAGGATTATATAGCCAAATATTTCAATAAGAAGGATGTTCAAAGAGCTCTACATGCCAACGTCACCAACTTGCCATATCCTTATACCCTTTGCAGCAATGTTATTAGGAAATGGAATGACTCACCAAACACAGTGCTGCCAATACTGAAGAAGCTGATGTTAAAAAATGGGGGAGGAGGGTTAAGGATTTGGATATACAGTGGTGACACAGATGGAAGAGTGCCAGTGACATCAACGAGATACAGCATAAAGAAGATGGGATTGAAGAGAAAAGAAGAATGGAGAGCATGGTTCAGCAGGAATGGACAAGTGGGTGGGTGGAGTGAAGAGTATGAGGGTGGAGTCACATTTGTAACAATTAGAGGTGCTGGTCACCAAGTTCCAATATTTGCACCTCAACAATCTCTTACTCTCTTTTCTCACTTCCTCTCTTCTCGACCCTTGCCATCTTCTCGCTTCTAG 795 0.4075 MGNAVINDVTDMSGLIDYAWSHAIISDEVYNGINKNCDFGKENQTKACDVNVEGLLKSYNEIDIYSIYSPICLNKYHHTHTSLSTKLLVAPRLLTRHDLWHSLPSGYDPCTEDYIAKYFNKKDVQRALHANVTNLPYPYTLCSNVIRKWNDSPNTVLPILKKLMLKNGGGGLRIWIYSGDTDGRVPVTSTRYSIKKMGLKRKEEWRAWFSRNGQVGGWSEEYEGGVTFVTIRGAGHQVPIFAPQQSLTLFSHFLSSRPLPSSRF 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc273136g00004 264 Gene3D alpha/beta hydrolase 1 83 IPR029058 -
Stsc273136g00004 264 Gene3D - 156 255 - -
Stsc273136g00004 264 FunFam Carboxypeptidase 156 256 - -
Stsc273136g00004 264 SUPERFAMILY alpha/beta-Hydrolases 1 261 IPR029058 -
Stsc273136g00004 264 Gene3D - 110 147 - -
Stsc273136g00004 264 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 1 243 IPR001563 GO:0004185|GO:0006508
Stsc273136g00004 264 ProSitePatterns Serine carboxypeptidases, histidine active site. 226 243 IPR033124 GO:0004185
Stsc273136g00004 264 Pfam Serine carboxypeptidase 1 255 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc273136g00004 Stsc-Chr273136 15007 16185 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc273136g00004 115 259 Calmodulin-binding Proteins AT2G22960 30.137 6.98e-13 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc273136g00004 K16297 - gmx:100799746 387.882