Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc273130g00002 ATGAGTTGCAACGGTTGCCGAGTTCTTCGAAAGGGTTGCAGTGAGACATGCATGTTGCGCCCTTGCTTGCAGTGGATCGAGACACCCGAGGCCCAAGGCCACGCCACCGTCTTCGTCGCCAAGTTCTTCGGCCGCGCCGGCCTCATGTCTTTCATTTCCAATGTACCGGAGACCCAAAGACCCGCTCTGTTTCAGTCACTGCTGTTTGAAGCGTGTGGAAGAACCGTGAATCCGGTTAATGGTGCCGTGGGGCTTTTATGGACGGGGAACTGGCACGTGTGCCAGGCGGCGGTGGAGACGGTGCTCCGAGGCGGCACCTTGAGGCCCGTGCCGGAGCTTATGGGACTGGAATCGGCCGGTCCGATGGTAGCCACCGACGCGGCATCGGAGGTTGAGGTCACGTGCGGTGACATGTGGAAGAAGGTTCGAGATCCGAACCCGAGTTGCAGGTTCACAAGCTCACGGTCTACACGTGTTGCAGCCGGCGTCGGTGCCGGCGGAGGGAAGCGGAAGCGGCAGGAGGTGGCGACGGTCCAGACGGCAGCTGATCTTGATCTCCGTCTGACGCCGATTTTCCTTCAGAAGATCGCCGATTACCGGCGCCGGCCTGGATCGCCGTCGATGACATCGGAGGAGTCCGTGACGACGACGGCGGAGATCGGTGGTGATCAGTGGGGTTACGGTGGTGATCGGAAAGTTCTCAACCTTTTCATTTGA 717 0.6011 MSCNGCRVLRKGCSETCMLRPCLQWIETPEAQGHATVFVAKFFGRAGLMSFISNVPETQRPALFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCQAAVETVLRGGTLRPVPELMGLESAGPMVATDAASEVEVTCGDMWKKVRDPNPSCRFTSSRSTRVAAGVGAGGGKRKRQEVATVQTAADLDLRLTPIFLQKIADYRRRPGSPSMTSEESVTTTAEIGGDQWGYGGDRKVLNLFI 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc273130g00002 238 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
Stsc273130g00002 238 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 216 - -
Stsc273130g00002 238 Pfam Lateral organ boundaries (LOB) domain 2 101 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc273130g00002 Stsc-Chr273130 7394 8860 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc273130g00002 1 238 AS2 family AT4G37540 56.154 1.81e-86 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Stsc273130g00002 LOB 5.7e-26 No_clan