Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc273090g00001 ATGACAACTGAATTTGGATCTGATGCTGTAACAGAGCAAATCGCACAGTTTTGGTGTGACGTTGATGAGGAGTATATTCCAAAGACTAGTTTGACTTTTCAGACTGTTGATGAAGTTGGCTTATTCTATAAAGAGTATGCCAAACGTGCAGGCTTTTCCACTAAAATAAGGAACTCGAATAGGTGCAAAGAGACCAAGGAAATAAAGAATCAACTCATCACATATAATAGAGAAGGGAAATGGACATCTGAAGTTCCTTCTATTGAGAAGACGAATCCGACGTGTGGTGCAAACTGTCCTGCACGAATTTATGTGCATGTAGATAAGAAGGCTTGA 336 0.3929 MTTEFGSDAVTEQIAQFWCDVDEEYIPKTSLTFQTVDEVGLFYKEYAKRAGFSTKIRNSNRCKETKEIKNQLITYNREGKWTSEVPSIEKTNPTCGANCPARIYVHVDKKA 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc273090g00001 111 Pfam FAR1 DNA-binding domain 42 109 IPR004330 -
Stsc273090g00001 111 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 21 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc273090g00001 Stsc-Chr273090 8203 8863 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc273090g00001 FAR1 1.9e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc273090g00001 - - adu:110280446 116.316