Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc273058g00003 ATGACAATGATTTTTTATGAAGTTCTAAGGTTATATCCTCCAATTGTTCCCTTCAATCGTGCTGTTCACAAAGATGTGAAACTTGGCAACCTTTTCCTTCCGGCAGGAGTACAAGTTTCCATGCCAATACTCTTGATTCATCATGATCCCAATATTTGGGGCGAGGATGCAACAGAGTTCAAACCGGAAAGATTCTCAGAAGGAGTTGCAAAGGCAACAAAAGGCCAAGCTTCATTCTTTCCATTCGGATTTGGTCCTAGAATATGCATTGGGCAAAATTTTGCTTTAATGGAAGCAAAGATAGTTTTGTCATTGCTTTTACAACGTTTCTCATTTGAGCTCTCCCCATCCTATACTCATGCTCCAACTGTTGCACTTTCTCTTAATCCGAAGCATGGGGCTCATGTTATCTTACATAAATTGTAG 426 0.3991 MTMIFYEVLRLYPPIVPFNRAVHKDVKLGNLFLPAGVQVSMPILLIHHDPNIWGEDATEFKPERFSEGVAKATKGQASFFPFGFGPRICIGQNFALMEAKIVLSLLLQRFSFELSPSYTHAPTVALSLNPKHGAHVILHKL 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc273058g00003 141 PANTHER CYTOCHROME P450 FAMILY MEMBER 1 134 - -
Stsc273058g00003 141 Gene3D Cytochrome P450 1 141 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc273058g00003 141 Pfam Cytochrome P450 2 121 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc273058g00003 141 PRINTS E-class P450 group I signature 43 67 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc273058g00003 141 PRINTS E-class P450 group I signature 79 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc273058g00003 141 PRINTS E-class P450 group I signature 89 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc273058g00003 141 PRINTS P450 superfamily signature 89 100 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc273058g00003 141 PRINTS P450 superfamily signature 3 14 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc273058g00003 141 PRINTS P450 superfamily signature 80 89 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc273058g00003 141 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 82 91 IPR017972 GO:0005506|GO:0016705
Stsc273058g00003 141 SUPERFAMILY Cytochrome P450 2 139 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc273058g00003 Stsc-Chr273058 14299 14724 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc273058g00003 1 141 Cytochrome P450 AT3G14630 67.376 1.13e-70 220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc273058g00003 - K17873 gmx:100790445 234.187