Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc273019g00004 ATGTTAATAGTTCCTATATTCCATGGGGGTTACCATGTCATAACCAAATTGGTACTCAATGATGGTGTCAACCAAGTAGTTTACTGTGTCTACAGAGATCTCATTGCCCTTTCAATCCTTGCTCCTCTTGCTTATTTCCATGACAAGCAGAGAAGACCACCAATTACAAAGGATCTACTAATATCATTCTTCTTTGTTGGATTATTTGGGGTAGTTGGAAACCAGCTTTTGTTTGTTATTGGTCTAAGCTTTACTAATCCATCATATGCTTCTGCCTTAGAGCCAACCGTTCCGGTCTTTACATTTCTGTTTTCTGTAATCATGGGCATAGAAAAAGTGAGCTTGCTAAGGTATGAAGGTGTGGCAAAGGTTGTTGGGACTATTATCTGTGTCTCTGGTGCAATATTGATGGTTCTGTATCATGGTCCAGCTGTTATAGGAAATTCAGAAACAGGAATGCAACATCAGCATGTATCACAAAATGAAACTGGATTGTTTACTTATGGGTTGAAATATATAGGATTAGATCAATTCAGTCTTGGGGTTATATGCATTGTAGGTCACTGCTTATCCTTGGGTGCTTACCTAGCCATTCAGGCACAAGTACTGAAAAAGTACCCCACAAGCATATTCATACTTCTTTGGAGTTGTATTGATGGTGATAATAACAATGTTTGTGTCTGA 684 0.3845 MLIVPIFHGGYHVITKLVLNDGVNQVVYCVYRDLIALSILAPLAYFHDKQRRPPITKDLLISFFFVGLFGVVGNQLLFVIGLSFTNPSYASALEPTVPVFTFLFSVIMGIEKVSLLRYEGVAKVVGTIICVSGAILMVLYHGPAVIGNSETGMQHQHVSQNETGLFTYGLKYIGLDQFSLGVICIVGHCLSLGAYLAIQAQVLKKYPTSIFILLWSCIDGDNNNVCV 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc273019g00004 227 Pfam EamA-like transporter family 1 137 IPR000620 GO:0016020
Stsc273019g00004 227 PANTHER WAT1-RELATED PROTEIN 1 218 IPR030184 GO:0016020|GO:0022857
Stsc273019g00004 227 SUPERFAMILY Multidrug resistance efflux transporter EmrE 31 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc273019g00004 Stsc-Chr273019 15497 17645 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc273019g00004 1 216 Nodulin-like Gene Family AT3G45870 54.587 6.08e-77 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc273019g00004 - - psat:127119930 280.026