Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc273005g00003 ATGGCATCAGGACTTGCTACTGTTAATAATATCGGCCAAATAGGCGAATCCCTTGGTTACACCATCCGCGAGACAGCATTTGGAACTTCCTTGCCCGTTTTCGGAAGATGTTATGTCTCGGATCAGTTTTTACATGCAAGAGGATGGGGTGCTCTATATGTTGGTTCAGTTTTGGTGGGTATCTGTTATGGCCCTCAGTGGTCACTAATGCCTACAATCACTTCTGAGATATTTGGTGTGGGGAATATGGGTAGCATATTCAACACCATTACAATAGCAAGCCCTGTGGGGTCTTACATATTTTCAGTGAGAGTTGTTGGGTATATATATGACAAAGAAGTATCAGAGGGAAACAAGTGCATTGGAACTCAGTGTTTTATATTGTCTTTCCTTATAATGGCATCTGCCACTGTTTTGGGTTCTCTGGAAGCTCTAGTTTTGTTTTTCCGGACAACAAACTATTATGGTCAGGTTGTACATAGAAGAATTCAGAATGTTTTGTAA 504 0.4107 MASGLATVNNIGQIGESLGYTIRETAFGTSLPVFGRCYVSDQFLHARGWGALYVGSVLVGICYGPQWSLMPTITSEIFGVGNMGSIFNTITIASPVGSYIFSVRVVGYIYDKEVSEGNKCIGTQCFILSFLIMASATVLGSLEALVLFFRTTNYYGQVVHRRIQNVL 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc273005g00003 167 SUPERFAMILY MFS general substrate transporter 38 151 IPR036259 -
Stsc273005g00003 167 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 48 156 - -
Stsc273005g00003 167 Gene3D MFS general substrate transporter like domains 9 154 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc273005g00003 Stsc-Chr273005 10940 11798 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc273005g00003 1 165 Nodulin-like Gene Family AT1G74780 52.020 7.52e-59 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc273005g00003 - - gmx:100814668 246.899