Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272969g00003 ATGTCCCTCGTAGTTGAAAAGAAATATCAAATAAGGACAACTCCAAACTATGGGCTTATGAATTTGGTTGTAGTCCACTATTGTATTCTCACCTTGGATCAAAACGTGATTGGGGCAACCAATAAGGTTGTTGGTGATGACAATAAGAGGTTGTATTCACCCTTTGTTTGCTTGGATTATTTGAAGTTTAGAGCGAATAATCAAAAGGGAAGGTTTGAGAAAGTTGGTTTAACTGTTACAGATTTTGCTGGAATCAACTCTTCATTTCTAGAAATTGGATCAGATCGTCGGCATTCGTTGCAGCTACGTTCTTCGAAGGATAAACCAAAGTGCCTATCGAATGGGGACACCAAGCCAAGCGAAAACGGTCGACAATGCCAACCGGAAGGCTCACTTGATATTGGTATTGATGCTGTTGAAGTCGCTGAAGTTCATACTGATGAGGTCGGGGAAAACAGTGTTGCAGAAGTGTCCAATGTGGAGGCGCATGTTGCGGGATCAAATGTCCCGCTGACTCTTGCAGAGGTCATTGAAATGGGAATGTTCGGAAGGGCTTTTCAGTTCTATGAACAGTATCGCAGGGGCAAGGGATTTTCGATGAGGCATGGCAGGAAGTCGAAGAATAAGAATGGTGAAATTGTTCGTTACACATTGTTGTGTAATCGGCAGGGTTTTTGGAAGAAGAAATTACTTGAAATGCCCGAAAGGAAAAAAGAGCACAAGGCTGTGACTAGGTATGGCTGCCCTGCTGAATTGCGCATAAAGCCGAAAGCAGGAACTTGTAGCTGGTATGTATCTTGA 801 0.4307 MSLVVEKKYQIRTTPNYGLMNLVVVHYCILTLDQNVIGATNKVVGDDNKRLYSPFVCLDYLKFRANNQKGRFEKVGLTVTDFAGINSSFLEIGSDRRHSLQLRSSKDKPKCLSNGDTKPSENGRQCQPEGSLDIGIDAVEVAEVHTDEVGENSVAEVSNVEAHVAGSNVPLTLAEVIEMGMFGRAFQFYEQYRRGKGFSMRHGRKSKNKNGEIVRYTLLCNRQGFWKKKLLEMPERKKEHKAVTRYGCPAELRIKPKAGTCSWYVS 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272969g00003 266 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 177 265 - -
Stsc272969g00003 266 Pfam FAR1 DNA-binding domain 187 265 IPR004330 -
Stsc272969g00003 266 MobiDBLite consensus disorder prediction 101 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272969g00003 Stsc-Chr272969 15165 17619 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc272969g00003 FAR1 1.8e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272969g00003 - - aip:107647209 127.487