Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272936g00001 ATGGGGGAGTTGAGTGAGGGCCTTACACAAGTTCTGATACCTGTGGCAGCATTAATTGGAATTGGATTTGCTTTGCTTCAATGGTTCTTGGTCTCAAAGGTCAGAGTGTGTGCTGTTGCTGATCGCAATGGCAGAGACAATGGGCACAAAAGTAGCTTACTAGGAGATGCAGAGTTGGAGAGTGGTGTTGGGGTTCCTGATGTTATTACAAAGTGTGCCGAAATTCAGCACGCCATTTCTGTTGGTGCTACTTCGTTTCTCTTTACTGAGTATAGGTACCTGACTATCTTCATGGGAGTATTTGGTGTGATAATTTTTCTGTTTCTGGGCTCTGTGAAGGGCTTTAGTACCAAAAGTGAACCTTGCACTTACAATGAAGGCAGTCTTTGTAAACCAGCACTTGCTAATGCTGTGTTTAGCACTATAGCTTTCTTGCTTGGTGCCCTTACCTCTGTTCTTTCTGGCTTTCTTGGGATGAAGATTGCTACCCATGCCAATGCTAGAACAACTCTTGAAGCAAGAAGGGGAATAGGAAAAGCCTTTGTTACTGCTTTCCGCTCTGGTGCTGTGATGGGTTTTCTTCTTGCTGCAAATGGCCTGTTGGTGCTATATGTTGCCATCAATTTGTTCAAACTGTATTATGGGGATGACTGGGAGGGACTTTACGAGTCTATCACTGGCTACGGGCTTGGTGGTTCTTCAATGGCGCTCTTTGGAAGAGTTGGAGGAGGCATATACACTAAAGCAGCTGATGTTGGTGCTGATCTCGTGGGAAAAGTTGAACAAAATATCCCTGAAGATGATCCACGCAACCCAGCTGTTATTGCTGACAATGTGGGAGACAATGTTGGAGATATAGCAGGTATGGGTTCTGACTTATTTGGGTCCTATGCAGAATCATCCTGTGCAGCTCTGTTTGTTGCATCCATATCATCATTTGGACTGAATCATGACTACGTGGCCATGTCATATCCGCTCATCATAAGCTCAATGGGAATTGTGGTTTGCTTGATTACGACTCTTTTTGCAACTGATATATTCGAAATAAAATACGAGAACCAAATAGAACCATCCTTGAAACGTCAGCTTCTTATCTCTACTGTATTCATGACTGTTGGTATTGCCATAGTCAGCTTCTTTGCTTTGCCATCAGAGTTCACTCTCTATAACTTTGGGGGCAGCAAGGTTGTCAAGAACTGGTATGACTAA 1209 0.4367 MGELSEGLTQVLIPVAALIGIGFALLQWFLVSKVRVCAVADRNGRDNGHKSSLLGDAELESGVGVPDVITKCAEIQHAISVGATSFLFTEYRYLTIFMGVFGVIIFLFLGSVKGFSTKSEPCTYNEGSLCKPALANAVFSTIAFLLGALTSVLSGFLGMKIATHANARTTLEARRGIGKAFVTAFRSGAVMGFLLAANGLLVLYVAINLFKLYYGDDWEGLYESITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVEQNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALFVASISSFGLNHDYVAMSYPLIISSMGIVVCLITTLFATDIFEIKYENQIEPSLKRQLLISTVFMTVGIAIVSFFALPSEFTLYNFGGSKVVKNWYD 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272936g00001 402 Pfam Inorganic H+ pyrophosphatase 70 381 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Stsc272936g00001 402 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 6 400 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272936g00001 Stsc-Chr272936 4071 5631 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272936g00001 4 400 Primary Pumps ATPases AT1G15690 72.388 0.0 592
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272936g00001 K23025 - gmx:100812548 683.33