Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272924g00001 ATGAAGCTAAGCATGCCTTGTTCATCACCTTCACCACCATCAACAACAACTCTCCAATGGTTAAGCCTAGTAGCAATAATTTGGCTCCAATCCATAAATGGAACAAACACAAATTTCCCAGCATACTCTTCCCAACTGAAAGAGCTTCTCTCAATCTCCCAAATCCAACTCAACAACCTTGCTTTTGCCTCAGATGCTGGAAAACTCTTTGGCTGGTTCTCTGGCCTTGCTTCTCTCTACCTTCCCCTTTGGCTTGTCCTCATCATAGGTTCCACTCTTGGCCTCATTGGCTATGGTGTTCAATATCTCTTCCTAACACACCACATCTCAAACCTCTCTTATTGGCATGTTTTCTTGCTAACATTCCTTGCTGGCAACAGCATTTGTTGGATCAACACAGTTTGTTATGTTGTCACAATCAAGAATTTCTTCTCACATAGCCAAGTAGCTGTGGGAATCACAACCAGCTACCAAGGTTTGAGTGCTAAGGTTTATACCAATGTTGTTGATGCTTTCTTCTCACCTCATAAGAACAAGGCCAGAGCATTTTTGTTCCTTAACTCTGTTTTGCCTCTGGCAATTGCCTTACTTGTTGCTCCTATACTTAGAGAAACCAAGAAAAACACATCAAATTTCAGTCATCACTATAATCATCACAATTATTATTATGGGTTTGGTGTGGTTTTTGTGATCACAATTGCAACTGGGGTTTATGCTGTGGTTAGTAGCTTGGAATTTGTGAGTAGCAAGATTTCATCACTTGGGATTCTAATTGGTATCTTAGTGTCACTTTTCTTGCCACTATTGGTTCCAATTTCAGTGAAGATGAATGAGTTAGCTAAGTCATGGCATGAAAATAAGGAGAAGCTTAGAGTGTACCATTACACTCTGGAGGAGAATTACACCACCAGCACAACCAATGAGGTGAAAGAGAGTGAAGAAGAAGGAGGAAAAGAAGTGTGTGTTAGAGAGGAAATTGGGGTGAAATTGATGGTGAAGAGAATAGATTTTTGGCTATATTTCTTTGTGTACTTATTTGGTGCAACAATTGGTTTGGTTTATCTGAATAACTTGGGACAAATTGCTGAATCAAGAGGAAGCTCAAACACTTCATCTTTGGTGTCTTTGTCTTCATCTTTTGGTTTCTTTGGACGTCTCATACCATCTCTCATGGACTATTTCCACAGGGGAAAATCAAGAATTTCAAGGCCAGCTTGCATGGTGGCACTAACTGCACCAATATCATGTGCATTCTTCTTACTACAAAACAGCACCGAAATCTCACTTTACATCAGCACTGCAGTTATTGGCGTCTGCACCGGAGCAATCACTTCCATTGCTGTCTCCACAACAACTGAGTTATTTGGAACAAACCATTTCTCAGTGAACCACAACGTTGTTGTTGCTAACATTCCAATGGGATCCTTCATTTTTGGTTATTCAGCTGCTATTCTCTACCATAAGGAAGGGCATAATAGTAACATCACTAATGATCATGGTCAATGCATGGGAATGAATTGCTTTGCTAATACTTTCAAAATTTGGGGCTGTTTTTGTTTCCTTGGAACTTTCTTGGCTCTCATTCTTTACGCTAGGACTCGGAAATTTTACTCGATATGA 1620 0.4012 MKLSMPCSSPSPPSTTTLQWLSLVAIIWLQSINGTNTNFPAYSSQLKELLSISQIQLNNLAFASDAGKLFGWFSGLASLYLPLWLVLIIGSTLGLIGYGVQYLFLTHHISNLSYWHVFLLTFLAGNSICWINTVCYVVTIKNFFSHSQVAVGITTSYQGLSAKVYTNVVDAFFSPHKNKARAFLFLNSVLPLAIALLVAPILRETKKNTSNFSHHYNHHNYYYGFGVVFVITIATGVYAVVSSLEFVSSKISSLGILIGILVSLFLPLLVPISVKMNELAKSWHENKEKLRVYHYTLEENYTTSTTNEVKESEEEGGKEVCVREEIGVKLMVKRIDFWLYFFVYLFGATIGLVYLNNLGQIAESRGSSNTSSLVSLSSSFGFFGRLIPSLMDYFHRGKSRISRPACMVALTAPISCAFFLLQNSTEISLYISTAVIGVCTGAITSIAVSTTTELFGTNHFSVNHNVVVANIPMGSFIFGYSAAILYHKEGHNSNITNDHGQCMGMNCFANTFKIWGCFCFLGTFLALILYARTRKFYSI 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272924g00001 539 Pfam Nodulin-like 19 272 IPR010658 -
Stsc272924g00001 539 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 20 538 - -
Stsc272924g00001 539 SUPERFAMILY MFS general substrate transporter 15 535 IPR036259 -
Stsc272924g00001 539 Gene3D MFS general substrate transporter like domains 213 534 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272924g00001 Stsc-Chr272924 14107 16970 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272924g00001 14 538 Nodulin-like Gene Family AT2G30300 48.674 4.25e-153 446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272924g00001 - - aip:107616135 858.211