Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272895g00002 ATGGAGGTGGAGAAGCTGTCAGCAACAGCGCCCTCAGTTTACAGGACCAGCTGCAGCAACAGAATAGCACTAATAAGAAGCCGCCGCCCAAGCGGACCTCCACCAAGGACCGCCACACCAAGGTGGACGGCCGCGGCCGCCGGATCCGGATCCGCGGCCGTGTTCCAGCTGACGAGGGAGTTAGGGCACAAATCCGACGGCGAGACGATCGAGTGGCTGCTACAGCAAGCGGAACCGGCGGTGATCGCCGCAACTGGAACCGGCACCATCCCCGCCAACTTCACCTCGCTCAACATCTCGCTCCGGAGCTCCGGATCCACCGTGTCGGCACCGTCACACTACTTCAGAGGAAGCTACTTCAATCCTAGCACGTTTTCCTCGGCCGCCGTTGCGGCCGCTGTCGGTGGCGGAAGGAGCCGCGGCGGAGCGGGTGATAATTGGGAGCGTAACATGAACATGAACATGAACATGAATATGAATATGAACATGAATATGAACATGGCAGCTATGGAAGATTCTAGAAGGATGTTGTTTCCCGGTTCATCCGAGAATTGTTCAAATTCCATGGGATTGAACTTCAACCCTAGCAACGTGAATGCCGTTCTCCAAACAAAGCAAGAACTCCGTGAAGACGGCGCCGCCGCAGACAGCAGCGGCGGTGGCGGAAATCTTGATTTGGTTGGCGGTGATTGCGAAGGAAGCATAGGGAGAAAGAGAAGAGTGGAGCAAGAGGTATCGGTTTCACATCAGGTAGGAAATTACTTGCTACAATCAAGTACCGCGGGTTCAATTCCGGCGAGCCACGCCTCGAATCCGGCAACGTTTTGGATGGTGGCTGGCCACCAAAGTATGAACGGTGGTGGCGGTGGCGGTGGTAGTAATGATCAAATTTGGGCAATTCCGTCCATGGCCAATTCCGTCTATAGAGGGGGTATGCCAAGTGGTGTTGGTGGGATTCATTTCATGAATTTTGCTTCACCAATGTCTCTTATGCCTTCCGCCATGGTCGGTGGCGGCGGCGGTGGTGGTGCAATGCTGAATGAAAGCAATAATTTAGGTATGCTTGCAGCTCTAAATGCCTATAGGCAGATTCCGGCCAATGGCAGCGGCGTTTCGGAGTCTCCGGCGAGCACCGGGCACCACCAACATCATGGTGGAGATGATGGGCCTGAGACAACAAGTCAACAACAACATTCTTGA 1200 0.5467 MEVEKLSATAPSVYRTSCSNRIALIRSRRPSGPPPRTATPRWTAAAAGSGSAAVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISLRSSGSTVSAPSHYFRGSYFNPSTFSSAAVAAAVGGGRSRGGAGDNWERNMNMNMNMNMNMNMNMNMAAMEDSRRMLFPGSSENCSNSMGLNFNPSNVNAVLQTKQELREDGAAADSSGGGGNLDLVGGDCEGSIGRKRRVEQEVSVSHQVGNYLLQSSTAGSIPASHASNPATFWMVAGHQSMNGGGGGGGSNDQIWAIPSMANSVYRGGMPSGVGGIHFMNFASPMSLMPSAMVGGGGGGGAMLNESNNLGMLAALNAYRQIPANGSGVSESPASTGHHQHHGGDDGPETTSQQQHS 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272895g00002 399 ProSiteProfiles TCP domain profile. 52 84 IPR017887 -
Stsc272895g00002 399 MobiDBLite consensus disorder prediction 366 399 - -
Stsc272895g00002 399 Pfam TCP family transcription factor 52 145 IPR017887 -
Stsc272895g00002 399 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 52 397 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272895g00002 Stsc-Chr272895 13185 14384 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272895g00002 6 331 TCP Transcription Factor Family AT3G47620 38.187 2.93e-33 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Stsc272895g00002 TCP 1.6e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272895g00002 - - adu:107489244 531.946