Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272875g00003 ATGGACTGTGGTTTCTATCTAGCGTTAACTTTGGTTTCATTGGGCAGCGTAGTGGGGTTTTACTCTAGTACGTGCCCTGGAGCGGAATCCATTGTTAGGTCCACGGTTCAGTCTCACCTTAACTCTGACCTTAGCTTGGCTGCGGGGCTTCTCAGGATGCACTTCCATGATTGCTTTGTTCAAGGTTGCGATGCTTCCCTCCTCATTGATGGCACCAATACTGAGAAGACTGCGCCACCCAACCTTGGACTCAGAGGCTTTGAGGTCATTGACGATGCAAAGACGCAGCTCGAGGCTGCCTGCCCTAATGTTGTGTCTTGTGCTGATATCCTTGCCCTTGCTGCCCGTGATTCTGTTGTTCTGAGTGGTGGAGGTAGTTGGCAAGTGCCAACTGGACGCAGAGATGGGCTAGTGTCACGTGACTCGGATGTCAAGTTGCCCGGACCGGGTGACTCTGTTGACGTGCAGAAACAGAAATTTTCGGCTTTGGGTCTCAACACAAAAGACCTTGTTACCCTTGTTGGTGGGCACACCATTGGCACTACAAGTTGTCAGCTTTTGAGCAGCAGGCTATACAATTTCAACGGAACAAATGGTCCTGACCCTACCATTGACCCTTCATTTCTTCCTCAGTTACAAACGCTTTGCCCTCAGAATGTTAGAGCTTCTACTAAGAGAGTGCCTCTAGATAACGGTAGCCAAACCAAATTTGATACATCTTACTTTAATAACGTGAGGAGGGGCAGGGGAATTCTGCAATCTGATCAGGTACTGTGGATTGATCCTTCCACAAAGCCATTTGTGCAGAGGTACTCACTTGGATCAACCTTTAACGTTGACTTTGGAAGTTCTATGGTCAAGATGAGCAACATTGGTGTCAAGACAGGTTCTGATGGTGAAATCCGCAAGAAATGTTCCGCTATTAATTAA 930 0.4774 MDCGFYLALTLVSLGSVVGFYSSTCPGAESIVRSTVQSHLNSDLSLAAGLLRMHFHDCFVQGCDASLLIDGTNTEKTAPPNLGLRGFEVIDDAKTQLEAACPNVVSCADILALAARDSVVLSGGGSWQVPTGRRDGLVSRDSDVKLPGPGDSVDVQKQKFSALGLNTKDLVTLVGGHTIGTTSCQLLSSRLYNFNGTNGPDPTIDPSFLPQLQTLCPQNVRASTKRVPLDNGSQTKFDTSYFNNVRRGRGILQSDQVLWIDPSTKPFVQRYSLGSTFNVDFGSSMVKMSNIGVKTGSDGEIRKKCSAIN 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272875g00003 309 CDD secretory_peroxidase 18 308 IPR033905 GO:0004601|GO:0042744
Stsc272875g00003 309 Gene3D - 19 309 - -
Stsc272875g00003 309 PRINTS Haem peroxidase superfamily signature 105 122 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc272875g00003 309 PRINTS Haem peroxidase superfamily signature 169 184 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc272875g00003 309 PRINTS Haem peroxidase superfamily signature 47 61 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc272875g00003 309 PRINTS Haem peroxidase superfamily signature 123 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc272875g00003 309 PRINTS Haem peroxidase superfamily signature 230 245 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc272875g00003 309 PRINTS Plant peroxidase signature 244 261 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc272875g00003 309 PRINTS Plant peroxidase signature 283 296 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc272875g00003 309 PRINTS Plant peroxidase signature 85 98 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc272875g00003 309 PRINTS Plant peroxidase signature 168 180 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc272875g00003 309 PRINTS Plant peroxidase signature 25 44 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc272875g00003 309 PRINTS Plant peroxidase signature 123 138 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc272875g00003 309 PRINTS Plant peroxidase signature 104 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc272875g00003 309 PRINTS Plant peroxidase signature 228 243 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc272875g00003 309 PRINTS Plant peroxidase signature 49 69 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc272875g00003 309 FunFam Peroxidase 19 157 - -
Stsc272875g00003 309 ProSitePatterns Peroxidases active site signature. 47 58 IPR019794 GO:0004601
Stsc272875g00003 309 FunFam Peroxidase 147 288 - -
Stsc272875g00003 309 Gene3D Peroxidase, domain 2 147 288 - -
Stsc272875g00003 309 SUPERFAMILY Heme-dependent peroxidases 18 309 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc272875g00003 309 ProSitePatterns Peroxidases proximal heme-ligand signature. 169 179 IPR019793 -
Stsc272875g00003 309 ProSiteProfiles Plant heme peroxidase family profile. 19 309 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc272875g00003 309 PANTHER PEROXIDASE 25-RELATED 12 297 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc272875g00003 309 Pfam Peroxidase 32 272 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272875g00003 Stsc-Chr272875 8514 9637 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272875g00003 15 309 Peroxidase AT5G64120 66.667 6.00e-140 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272875g00003 K00430 - gmx:100820620 431.024