Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272848g00003 ATGAGGTTGTTGGAGTTTTGGTGTATATTTATAGTGATTATATTGGCCAATGTTCTTGAACCTGGGAAGGCAGAGGTTTTCATAGTAACAGTTGAAGGTGAGCCTATCATAAGTTACACTGGTGGTATTGATGGGTTTGAAGCTACTGCTGTGGAATCTGATGAGAAGATCGATACCACAAGTGAATTGGTCACTTCTTATGCACGGCACCTTGAGAAAAGACATGATATGCTACTGGAAATGTTGTTTGACACGGGGACATACACAAAACTCTATAGTTATAAACATCTTATAAATGGGTTTGCAGTGCATCTTTCCCCAGAACAGGCAGAAACTCTTAGACATGCTTCTGGTGTTAAATCTGTTGTGAGGGACTGGAAAGTGAAGAGACTTACAACACATACCCCACAATTTTTGGGGCTTCCAACTGGAGTGTGGCCGACGGGAGGTGGCTATGATCGGGCCGGAGAAAACATAGTGATTGGATTTGTGGACTCTGGGATATATCCTCACCATCCCAGCTTTGTTACTTATAATACTGAACCATATGGGCCACTTCCAAAATATAGAGGAAAATGTGAGGTTGACCCGGAGACTAAAAGAAGTTTCTGTAATGGGAAGATTATAGGAGCACAGCATTTTGCTCAAGCTGCAATAGCTGCTGGGGCATTTAACCCTATAGTAGATTTTGCTTCTCCTTTGGACGGGGATGGGCATGGAAGTCATACTGCCTCTATTGCAGCTGGAAGAAATGGAATTCCTGTGAGGATGCATGGACATGAATTTGGGAAAGCAAGTGGAATGGCTCCTCGTGCCAGGATTGCTGTGTACAAAGCACTCTATAGACTTTTTGGAGGTTTTATTGCAGATGTAGTTGCAGCAATTGATCAGGCAGTACATGATGGGGTGGACATACTCAGCCTTTCTGTAGGACCCAACAGTCCTCCAGCAACCACCAAAACCACTTATTTAAACCCATTTGATGCTACACTTCTTGGAGCTGTGAAAGCTGGTGTCTTTGTTGCACAGGCTGCCGGAAACGGTGGCCCTTTTCCTAAGACTTTAGTTTCATATAGTCCATGGATAACATCTGTAGCAGCAGCAATTGATGATCGTAGATATAAAAATCATCTGACTCTTGGAGATGGAAAGATCTTGGCTGGAATTGGTCTATCACCTTCTACACATTTTAACCAGTCATACACATTGGTTGCTGCGACTGATGTTGTGCTAGACTCCTCAGTTATGAAGTACAATCCCACGGATTGCCAGAGACCAGAACTTCTAAACAAGAACTTGATAAAGGGGAATATTCTTCTATGTGGTTATTCTTTCAACTTTGTAGCTGGTTCTGCTTCAATAAAAAAGGTTTCAGAAACAGCGAAGGCTCTTGGTGCAGCTGGATTTGTTCTGTGTGTTGAAACTGTTTCTCCTGGAGCAAAATTTGATCCAGTCCCTGTTGGTGTTCCTGGGATTGTTATTGCAGATGTCAGTAAATCAAAGGAACTAATAGATTATTATAACATTTCTACTCCAAGAGACTGGACTGGAAGGGTAAAGAGTTTTAAAGCTACCGGAAAAATTGGGGATGGTTTGATGCCTATTCTTCATAAGTCTGCACCACAGGTGGCTTTATTCTCTGCTAGAGGACCAAATATAAAGGACTTTAATTTCCAAGAGGCAGATCTTCTCAAGCCAGATATATTGGCACCGGGATCATTAATTTGGGGTGCTTGGTCTCTAAATGGAACTGATGAACCGAATTATGTTGGAGAGGGATTTGCCATGATATCGGGAACTAGCATGGCTGCACCGCACATAGCCGGAATTGCTGCTCTCATAAAGCAGAAACATCCACATTGGAGCCCTGCCGCCATCAAATCAGCGTTGATGACAACAACAACAACTCTAGACAGAGCAGGAAATCCTATTCTAGCCCAGCAATATTCCGAAACCGAAGCTATGAAACTAGTAAAAGCTACTCCTTTTGATTATGGGAGTGGACATGTTAATCCAAGAGCTGCTTTGGACCCTGGGCTAATCTTTGATGCAGGATACAATGATTTTCTAGGGTTCTTGTGCACAACACCCGGCATCGACATTCATGAGATAAAGAATTATACAAACACACCATGCAACACCACAATGGGCAACCCAGCAAATCTAAACAGTCCTTCTATTACAATTTCCCATCTAGTAAGAACTCGAGTTGTCACCCGAACCGTCACAAATGTTGCAGAGGAAGAAGAAACATATGTGAATACAGCTAGAATGGACCCTGCAGTTGCCATTGAAGTCAATCCTCCAGCAATGACCATCAGACCAGGCGCATCACGTAAGTTTACCGTGACACTAACAGTTCGGTCTGTGACCGGAACTTACAGTTTCGGAGAGGTTTTGATGAAAGGGAGCAGAGGGCACAAGGTGAGGATCCCTGTTCTGGCCAATGGTTACTCAAGATAG 2463 0.4324 MRLLEFWCIFIVIILANVLEPGKAEVFIVTVEGEPIISYTGGIDGFEATAVESDEKIDTTSELVTSYARHLEKRHDMLLEMLFDTGTYTKLYSYKHLINGFAVHLSPEQAETLRHASGVKSVVRDWKVKRLTTHTPQFLGLPTGVWPTGGGYDRAGENIVIGFVDSGIYPHHPSFVTYNTEPYGPLPKYRGKCEVDPETKRSFCNGKIIGAQHFAQAAIAAGAFNPIVDFASPLDGDGHGSHTASIAAGRNGIPVRMHGHEFGKASGMAPRARIAVYKALYRLFGGFIADVVAAIDQAVHDGVDILSLSVGPNSPPATTKTTYLNPFDATLLGAVKAGVFVAQAAGNGGPFPKTLVSYSPWITSVAAAIDDRRYKNHLTLGDGKILAGIGLSPSTHFNQSYTLVAATDVVLDSSVMKYNPTDCQRPELLNKNLIKGNILLCGYSFNFVAGSASIKKVSETAKALGAAGFVLCVETVSPGAKFDPVPVGVPGIVIADVSKSKELIDYYNISTPRDWTGRVKSFKATGKIGDGLMPILHKSAPQVALFSARGPNIKDFNFQEADLLKPDILAPGSLIWGAWSLNGTDEPNYVGEGFAMISGTSMAAPHIAGIAALIKQKHPHWSPAAIKSALMTTTTTLDRAGNPILAQQYSETEAMKLVKATPFDYGSGHVNPRAALDPGLIFDAGYNDFLGFLCTTPGIDIHEIKNYTNTPCNTTMGNPANLNSPSITISHLVRTRVVTRTVTNVAEEEETYVNTARMDPAVAIEVNPPAMTIRPGASRKFTVTLTVRSVTGTYSFGEVLMKGSRGHKVRIPVLANGYSR 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272848g00003 820 CDD PA_subtilisin_like 378 516 - -
Stsc272848g00003 820 SUPERFAMILY Subtilisin-like 131 680 IPR036852 GO:0004252|GO:0006508
Stsc272848g00003 820 Pfam Fibronectin type-III domain 721 814 IPR041469 -
Stsc272848g00003 820 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 85 813 IPR045051 -
Stsc272848g00003 820 Pfam Peptidase inhibitor I9 28 129 IPR010259 -
Stsc272848g00003 820 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 130 IPR037045 -
Stsc272848g00003 820 PRINTS Subtilisin serine protease family (S8) signature 598 614 IPR015500 -
Stsc272848g00003 820 PRINTS Subtilisin serine protease family (S8) signature 235 248 IPR015500 -
Stsc272848g00003 820 PRINTS Subtilisin serine protease family (S8) signature 156 175 IPR015500 -
Stsc272848g00003 820 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 161 172 IPR023827 -
Stsc272848g00003 820 Gene3D - 371 536 - -
Stsc272848g00003 820 FunFam Subtilisin-like protease SBT1.5 158 379 - -
Stsc272848g00003 820 Gene3D - 693 817 - -
Stsc272848g00003 820 CDD Peptidases_S8_3 132 633 IPR034197 -
Stsc272848g00003 820 Pfam Subtilase family 156 641 IPR000209 GO:0006508|GO:0008236
Stsc272848g00003 820 Gene3D Peptidase S8/S53 domain 158 689 IPR036852 GO:0004252|GO:0006508
Stsc272848g00003 820 ProSiteProfiles Serine proteases, subtilase domain profile. 125 676 - -
Stsc272848g00003 820 ProSitePatterns Serine proteases, subtilase family, serine active site. 599 609 IPR023828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272848g00003 Stsc-Chr272848 15249 21853 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272848g00003 2 820 Subtilisin-like Serine Gene Family AT4G30020 80.000 0.0 1354
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272848g00003 - - gmx:100784999 1440.25