Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272826g00002 ATGGAAGTTGATATATTGCAGTATTTGAAGTCTTTGAAGGCCAGCCATCAAAGAATCTTATGGCTGAAAGATGAAGAAGGAAGTGTCTCTATTGACTGTCTCTATATGTTAAGATCAATTGTCCCCAAGATCAGCAAGGTCTCCCATTCCCCAACAAAAGAAGATAACTTGGAAGAAGTGGAGGAGGGTACAAGTCAGCAAAATCTCTTGGGGGTTTCTAAGGAACTCAAGCCAAATGAAGCAATGGTTAGAAATTCACCAAAGTTTGATATTGAGAGGAGAGACAATAACACCATGATCAGCATCTGTTGTGCCACAAAGCCACGATTGTTATTGTCAACAGTGAATACATTGGAAGTATTAGGCCTTGAGATTCAAAAATGTGTCATAAGTAGCTTCAATGATTTTTCAATACAGACATCTTACTTAGAGGTAGCGGAGCATAGAGATTGTGTTGACCCTGAAGAGATAAAGCAAGAACTATTCAAAAATGCAGGCTATGGTGGGAAATGCCTTTAA 519 0.3892 MEVDILQYLKSLKASHQRILWLKDEEGSVSIDCLYMLRSIVPKISKVSHSPTKEDNLEEVEEGTSQQNLLGVSKELKPNEAMVRNSPKFDIERRDNNTMISICCATKPRLLLSTVNTLEVLGLEIQKCVISSFNDFSIQTSYLEVAEHRDCVDPEEIKQELFKNAGYGGKCL 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272826g00002 172 CDD ACT_UUR-ACR-like 98 159 - -
Stsc272826g00002 172 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 34 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272826g00002 Stsc-Chr272826 13984 17408 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272826g00002 32 172 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 49.669 1.26e-39 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272826g00002 - - gmx:100784145 196.823