Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272813g00001 ATGGCTTCATTTTCTCTCTTCTTTCTTGTTCATCTTCTTCTCCTTCTACTAACACCATATGCTCTTTGCCAACTTGAAGAATTTGTGAGCATTGATTGTGGTGGAACAAGCTATTACAATGATTCAACAACAGGGTTGCCATGGATTCCGGATTCTGAAATCATGAAACATGGTAAAGCTGTGGAAGTTCAAAGCCCAAATGGTGAGGTTCCTCTTCAGTACAAGACAAGGAGGGACTTTCCAATAGACAGCAGAAAGTACTGTTACACACTGAAAACTGAGGAGAGGAGAAGGTACCTTGTCAGAGCAAGTTTTCAATATGGGAACTTGGAAGATGGAGACACATACCCTCAATTTCTGCTCTTCTTGGATGCAACCAAATGGGCCACTGTGTCAATCTATGATGCATCAAGGGTCTATGTGAAGGAGATGATTTTCAGAGCACCCTCGGACTCCGTTGATGTTTGCATGTGTTGTGCCACCACGGGCTCCCCATTCATTTCCACACTGGAGCTTAGGCCATTGAATGTGTCGATGTATGCCACAGATTTCGAGGATGATTTCTTCTTGAAAGTGGCTGCAAGAATTAACTTTGGTGCTACTAGTGAGGATGCTGTCAGGTATCCAGATGATCCATATGATAGAATCTGGGATTCCGATCTCATTAAAAGACAAAACTTTCTGGTTGGGGTGGCCCCAGGCACAATTAGAATTAACACAACAAAGAATATAGATATACAGACAAGAGAATACCCTCCTGTTAAAGATCTGGGTAAGAACAAGACTCGAAAATTCAAATTGGAGCAACCTTATATACCTGACTATAGCAATGCAGTGGTTAACATAGCTGAGAATGCGAATGGTAGCTACACTCTATATGAACCAAGTTACATGAATGTGAGTCTGGATTTTGTTCTTTCCTTCTCCTTTGTTAAGACCAGGGATTCCACTCAAGGACCTCTTCTAAACGCAATGGAAATAAGCAAATATGTAGAAATCGCTTCCAAAACTGACAAAGAAGATGTAAATGTAGTAAATGTGTTTCACTCCTTGTCTTCCGAAACTGACCCGAATAATGAAGGGGATCCCTGTGTTCCAACACCCTGGGAGTGGGTGAATTGTAGTGCAACTACCCCTCCAAGAATCACAAAGATAAACCTGTCAAGAAGGAATGTGAAAGGTGCAATTCCACAAGAGCTAAACAACATGGAAGCATTGACAGAGTTGTGGTTAGATGGTAACTTGCTTACAGGAACAATACCTGACATGAGCAATCTTATCAATCTAAAGATTGTGCATTTAGAGAACAACCAATTGACCGGTCCATTACCGTCTTACTTGGGTAGTTTGCCAAATTTGCAAGCACTGTTCATACAGAATAACTCATTTAGAGGAGAAATACCAACAGGACTATTATCTGGAAAAATTATTTTCAACTATGATAATAATCCTGAACTACATAGAGGGAACAAGAAGCATTTTCAGTTGATTCTAGGAGCTTCAATCGGAATACTTGTAATATTATTACTATTATTCTTAACGAGTTTGCTGCTAATGCATAATGCACGGAGAAAGGCATCTAAACAGAAATGTGACGAAAAAGGGATTTCCAGACTCAGTACAAAGCCATTAACCGGATACTCGTTTGGTAAGGGTGGAACTTTAATGGATGAGGGTACTGCTTACTATATTTCACTCTCGGAGTTGAAAGAAGCTACTAATAATTTTTCGAGGAAAATCGGGAAAGGGAGCTTCGGATCTGTCTACTATGGGAGAATGAAAGATGGAAAGGAGATTGCTGTTAAGACTATGACCGATCCATCAAGCCATGGGAACCAACAGTTTGTGACTGAGGTAGCTCTCCTCTCAAGAATTCATCACAGAAACTTGGTTCCTTTGATTGGATATTGTTCGAGCCAAAAACAATTGGACTGGTTAGCACGCCTCCGGATTGCAGAAGATGCAGCGAAAGGCCTTGAATACTTACACACAGGATGCAATCCTAGTATCATTCACCGAGATGTAAAGACGAGCAATATTCTCCTCGACATAAATATGAGAGCGAAAGTGTCAGATTTTGGACTATCAAGATTAGCCGAAGAAGATTTGACTCATATATCAAGTGTTGCAAGAGGAACTGTAGGCTACCTGGATCCTGAGTACTATGCAAGTCAACAATTAACCGAAAAGAGTGATGTGTATAGTTTTGGAGTTGTTTTGCTGGAATTGATATCCGGAAGAAAGCCGGTGTCACCGGAAGATTACGGTCCAGAAATGAATATAGTTCATTGGGCAAGATCCTTAGTCCGAAAAGGAGACGTTGTAAGCATCATGGATCCATCCCTGGTTGGGAATGTCAAAACCGAGTCTGTTTGGAGGGTTGCTGAAATTGCCATGCAATGTGTAGAGCAACATGGTTTCTCCAGACCAAGGATGCAAGAAGTCATTTTAGCCATACAAGATGCCTCCAGGATCGAAAAAGGTTCCGAAAATCACCTAAAATTAACATCATCATCATCGTTATCTTCAGGAAGCTCAAAACCACAATCTTCAAGGAAAACATTACTTACAAGTTTTCTTGAAATTGAAACCCCTGACTTGTCACAAGGTTGTCTCCCATCAGCAAGATAA 2631 0.4086 MASFSLFFLVHLLLLLLTPYALCQLEEFVSIDCGGTSYYNDSTTGLPWIPDSEIMKHGKAVEVQSPNGEVPLQYKTRRDFPIDSRKYCYTLKTEERRRYLVRASFQYGNLEDGDTYPQFLLFLDATKWATVSIYDASRVYVKEMIFRAPSDSVDVCMCCATTGSPFISTLELRPLNVSMYATDFEDDFFLKVAARINFGATSEDAVRYPDDPYDRIWDSDLIKRQNFLVGVAPGTIRINTTKNIDIQTREYPPVKDLGKNKTRKFKLEQPYIPDYSNAVVNIAENANGSYTLYEPSYMNVSLDFVLSFSFVKTRDSTQGPLLNAMEISKYVEIASKTDKEDVNVVNVFHSLSSETDPNNEGDPCVPTPWEWVNCSATTPPRITKINLSRRNVKGAIPQELNNMEALTELWLDGNLLTGTIPDMSNLINLKIVHLENNQLTGPLPSYLGSLPNLQALFIQNNSFRGEIPTGLLSGKIIFNYDNNPELHRGNKKHFQLILGASIGILVILLLLFLTSLLLMHNARRKASKQKCDEKGISRLSTKPLTGYSFGKGGTLMDEGTAYYISLSELKEATNNFSRKIGKGSFGSVYYGRMKDGKEIAVKTMTDPSSHGNQQFVTEVALLSRIHHRNLVPLIGYCSSQKQLDWLARLRIAEDAAKGLEYLHTGCNPSIIHRDVKTSNILLDINMRAKVSDFGLSRLAEEDLTHISSVARGTVGYLDPEYYASQQLTEKSDVYSFGVVLLELISGRKPVSPEDYGPEMNIVHWARSLVRKGDVVSIMDPSLVGNVKTESVWRVAEIAMQCVEQHGFSRPRMQEVILAIQDASRIEKGSENHLKLTSSSSLSSGSSKPQSSRKTLLTSFLEIETPDLSQGCLPSAR 876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272813g00001 876 Gene3D Phosphorylase Kinase; domain 1 553 638 - -
Stsc272813g00001 876 MobiDBLite consensus disorder prediction 829 852 - -
Stsc272813g00001 876 Pfam Malectin-like domain 257 329 IPR024788 -
Stsc272813g00001 876 Pfam Malectin-like domain 31 254 IPR024788 -
Stsc272813g00001 876 SMART serkin_6 574 825 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc272813g00001 876 MobiDBLite consensus disorder prediction 832 852 - -
Stsc272813g00001 876 ProSiteProfiles Protein kinase domain profile. 574 835 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc272813g00001 876 Gene3D Transferase(Phosphotransferase) domain 1 639 855 - -
Stsc272813g00001 876 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 377 473 - -
Stsc272813g00001 876 ProSitePatterns Serine/Threonine protein kinases active-site signature. 670 682 IPR008271 GO:0004672|GO:0006468
Stsc272813g00001 876 PANTHER OS07G0107800 PROTEIN-RELATED 423 822 - -
Stsc272813g00001 876 ProSitePatterns Protein kinases ATP-binding region signature. 580 602 IPR017441 GO:0005524
Stsc272813g00001 876 Pfam Protein tyrosine and serine/threonine kinase 640 816 IPR001245 GO:0004672|GO:0006468
Stsc272813g00001 876 SUPERFAMILY L domain-like 364 486 - -
Stsc272813g00001 876 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 626 832 - -
Stsc272813g00001 876 SUPERFAMILY Protein kinase-like (PK-like) 559 816 IPR011009 -
Stsc272813g00001 876 Gene3D Ribonuclease Inhibitor 337 491 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272813g00001 Stsc-Chr272813 3807 10765 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272813g00001 15 876 Receptor kinase-like Gene Family AT1G67720 64.687 0.0 1172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Stsc272813g00001 Malectin_like 1.1e-59 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272813g00001 - - gmx:100807148 1433.7