Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272802g00001 ATGGATCTTTTCTCAATTGAATCCCTTCTACTTTTTTTCTCTCTCTCCATTTTTATTTTCTTCTACCTTCACCATCAATTCTACACCACCAAGACACCCTTCAAAACCTACCCTCTCCTAGGTTCACTCCCTCACTTCATCCTCAACCGCCACCGCTTCCTCGACTGGTCCACCGACATCCTCCGCCACTCCCCTACTCAAACCGCCATCTTCTTCCGCCCCGGCACCGTCCACGGCGTCATAACCGCCAATCCCGACAACGTGGAGCACATGCTCAAGACTAATTTCCATAACTACCCCAAGGGCAACCGCTTCCTCTTCCTCCTCCACGACTTCCTTGGCCACGGAATCTTCAACTCCGACGGATACCTCTGGAAACTCCAACGCAAAACCGCAAGCTACGAATTCAACACCAAATCTCTTCGAAACTTCGCCATCCAAAACGTCACCGTCGAGATCCAAACGAGGCTCATTCCCTTGCTTCAAAGAGCTTCGGAGTCTGAAACCGTTCTTGATTTGCAGGACGTTCTTGAACGGTTCGCCTTCGATAACGTCTGCAAGCTCGCCTTCAACGTTGATCCTGCATGCCTCGGCGGCGGATCCACTGCCGGCGACGGTTTCATGCGCGCGTTCGAGGATGCCACGACGCTGAGCTCCGGGAGGTTCATGAGTGCGCATCACTGGCTATGGAGAATCAGGAGGTTCCTCAATATTGCAGACGAAAAGAGGCTTAAAGAATCGATCTCGACGGTTCACGCTTTCGCCGATGAGATCATACGGTCCAGGATGGAAGCCAAGGGCCCCACCAACACTGACGTGGACTTACTGTCGCGGTTTATGGCCTCAGAGGATAACTCCCCTGGCTTTCTCCGCGATATCGTTATAAGCGTGATTCTTGCAGGGCGCGATACGACGTCGTCTGCGCTGAGCTGGTTCTTTTGGATTCTTTCTTCCAGACCCGACGTGAAAGAAAAAATAATCCAAGAAATCAAAAGCGTTCGCGAAAATGGGGAATCATCAGCACCGTTTGGATACGAAGAGTTGAAGGAGATGAATTACTTGCTGGCGGCGATTTCGGAGGCGATGAGATTGTACCCGCCAGTGCCGGTTGACTTCAAGAAATGCTCAAACGACGACGTTTTGCCGGATGGTACGGTTATAAAGAGGAACTGGTTTATAATGTATCATGCTTACGCCATGGGGAGGATGGAGAATATTTGGGGGAAGGATTGTTGTGAATATAAGCCTGAAAGGTGGTTTGATTTTGATGAGGATGGTAATCAAGTGTGGCGAAGTGAAAGCCCGTTCCGGTATCCGGTGTTTCACGGTGGGCCGAGGATGTGCTTGGGGAAGGATATGGCTTACATTCAGATGAAGTCCATTGTGGCTTCTGTTTTGGAGAGGTTTGAGATTGATGCTGTGGATAAGGACACGTGTCCTGAGCACATTCTTGCTTTAACTTTGAGGATGAAAGGAGGGTTGCCTGTGAGAGTGAGAGTGACGCCATCACAGATGTGA 1518 0.5033 MDLFSIESLLLFFSLSIFIFFYLHHQFYTTKTPFKTYPLLGSLPHFILNRHRFLDWSTDILRHSPTQTAIFFRPGTVHGVITANPDNVEHMLKTNFHNYPKGNRFLFLLHDFLGHGIFNSDGYLWKLQRKTASYEFNTKSLRNFAIQNVTVEIQTRLIPLLQRASESETVLDLQDVLERFAFDNVCKLAFNVDPACLGGGSTAGDGFMRAFEDATTLSSGRFMSAHHWLWRIRRFLNIADEKRLKESISTVHAFADEIIRSRMEAKGPTNTDVDLLSRFMASEDNSPGFLRDIVISVILAGRDTTSSALSWFFWILSSRPDVKEKIIQEIKSVRENGESSAPFGYEELKEMNYLLAAISEAMRLYPPVPVDFKKCSNDDVLPDGTVIKRNWFIMYHAYAMGRMENIWGKDCCEYKPERWFDFDEDGNQVWRSESPFRYPVFHGGPRMCLGKDMAYIQMKSIVASVLERFEIDAVDKDTCPEHILALTLRMKGGLPVRVRVTPSQM 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272802g00001 505 PANTHER CYTOCHROME P450 23 496 - -
Stsc272802g00001 505 CDD CYP86A 74 494 - -
Stsc272802g00001 505 PRINTS P450 superfamily signature 439 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272802g00001 505 PRINTS P450 superfamily signature 448 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272802g00001 505 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272802g00001 505 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272802g00001 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 441 450 IPR017972 GO:0005506|GO:0016705
Stsc272802g00001 505 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272802g00001 505 PRINTS E-class P450 group I signature 438 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272802g00001 505 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272802g00001 505 PRINTS E-class P450 group I signature 448 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272802g00001 505 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272802g00001 505 Gene3D Cytochrome P450 23 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272802g00001 505 SUPERFAMILY Cytochrome P450 35 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272802g00001 505 Pfam Cytochrome P450 69 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272802g00001 Stsc-Chr272802 20994 22511 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272802g00001 34 499 Cytochrome P450 AT3G56630 60.341 0.0 592
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272802g00001 - - qsa:O6P43_006322 702.205