Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272793g00003 ATGTTGACTTTTGAGGGTGAAACCAACAAAGACAATGCAATTAGGGTTCCTCTAGAGCGTAGCAGACAAGCACCGGCAAGAGTCACCATCTTGGGCCTCTACTTGACCTGCATTCTTGACGCCGTTATGTACTTCCATGCTCCTGAAGTTGAAAGGCATATCAAGCATGACTTGAAGAAGACATGGAAGCAGTTCAAAACTAGCAAGGCAGAGAAGATCAGAACTCAAAACTCAAAGGGAAAGGAAGATGGGAAGCTCAATATGCAGAATGTCCCAGACTTCTCGGCAGTCCTCATCTTCTGCAGGATTAGCGGAATTGACTTCGAGGAGATTAAGAAGAGGGACTATGAAAATACCTCTTGCGACTTGGTTGCAATAGTTGGTGCTATCCGCTCTGCTACTTACATGCAGTTGTTTGATGTCTTTATAGAAGTAAACCCTCTGCAGAAAGTTCCGGCTATTGTTCATGGAAGCTTGAAGCTCTCTGAGAGCCATGCAATCCTAGTATATCTTGCTTCTGCCTTTACTGGAATTGCTGACCACTGGTATCCAACTGAGCTGTTTAGAAGGGCCAAAATTAACTCAGTAATGGATTGGCATACTCTAATTTACGAAATGGAGCAGAGGATATTTGGCTCAATGGAGATGGAGGCTTTCTGTGTAATGGTATCCAACCATCCGTGGCAGATCTCAGCATGGTTTGTGAACTTATGCAACTTGAGCTCAGATTTTTTCTCGTTAACTGCAGAAGCTGCGGTAGTTAAAGGAGGGTACTGGTATTATGACAGTGGCCTTGATGCTTCAGCCATTGACTCCTCTTACTTCACACATCTCTTCTGTGCTTTTGCAGATTTAGCTTCAAACACCAACAAGATCACATTACCTTCATCCACCTTCTCAACCTTCACACAAACTGTTCAGAAAAAGAATCCTTCAGTGAAAACCCTTCTCTCCATAGGAGGAGGTGGAGGTCCTACTTTAGCATCTAAGTTTTCTACAATGGCTAGACAGGACAGTTCCTGCAAAACCTTCATAGACAATTAA 1044 0.4349 MLTFEGETNKDNAIRVPLERSRQAPARVTILGLYLTCILDAVMYFHAPEVERHIKHDLKKTWKQFKTSKAEKIRTQNSKGKEDGKLNMQNVPDFSAVLIFCRISGIDFEEIKKRDYENTSCDLVAIVGAIRSATYMQLFDVFIEVNPLQKVPAIVHGSLKLSESHAILVYLASAFTGIADHWYPTELFRRAKINSVMDWHTLIYEMEQRIFGSMEMEAFCVMVSNHPWQISAWFVNLCNLSSDFFSLTAEAAVVKGGYWYYDSGLDASAIDSSYFTHLFCAFADLASNTNKITLPSSTFSTFTQTVQKKNPSVKTLLSIGGGGGPTLASKFSTMARQDSSCKTFIDN 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272793g00003 347 SUPERFAMILY (Trans)glycosidases 244 347 IPR017853 -
Stsc272793g00003 347 SUPERFAMILY Thioredoxin-like 137 176 IPR036249 -
Stsc272793g00003 347 Gene3D - 179 234 - -
Stsc272793g00003 347 Pfam Glutathione S-transferase, N-terminal domain 142 172 IPR004045 -
Stsc272793g00003 347 Gene3D Glutaredoxin 87 176 - -
Stsc272793g00003 347 PANTHER GLUTATHIONE S-TRANSFERASE T1-RELATED 95 201 IPR043377 -
Stsc272793g00003 347 Pfam Glycosyl hydrolases family 18 257 347 IPR001223 GO:0005975
Stsc272793g00003 347 Gene3D Glycosidases 253 347 - -
Stsc272793g00003 347 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 81 179 IPR004045 -
Stsc272793g00003 347 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 253 347 IPR001223 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272793g00003 Stsc-Chr272793 13436 16741 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272793g00003 96 200 Glutathione S-transferase Gene Family AT5G41210 51.429 4.63e-29 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272793g00003 - - gmx:100810671 129.028