Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272789g00001 ATGCCCGTAAAGAGTGGCCTGATTCATGTTGAAAGAAATCAGGCAAAGTCTGATGTTGCAGAAGCTTATGAGTTCCTATTGACTGAAAAGAGAAATACCCTTTGGCCAGTGGTATGCTGTTTGCGTTTCTGGCACCGGGGTACACTTGAGAAGAGAACAGATCTTCTACAGCGTGCTGAAGTTCGTGTTTGTGCATTTGACATTGAGACCACAAAACTTTCACTCAAATTTCCTGATGTTGACTATGATTTAACTATGATGATTTCATACGTGTGTGTTGGTGATGACATAGAGGATTTAGAGTACACTCCTAAACCAGAGTTTGTATGGTGTTCTAAGGTTAGAAATGTTCAAAATGAGATTGAGCTTCTTAGATTATGA 381 0.3963 MPVKSGLIHVERNQAKSDVAEAYEFLLTEKRNTLWPVVCCLRFWHRGTLEKRTDLLQRAEVRVCAFDIETTKLSLKFPDVDYDLTMMISYVCVGDDIEDLEYTPKPEFVWCSKVRNVQNEIELLRL 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272789g00001 126 Pfam DNA polymerase family B, exonuclease domain 57 125 IPR006133 -
Stsc272789g00001 126 PANTHER DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A 48 125 IPR029703 GO:0003677|GO:0003887|GO:0006260|GO:0006281|GO:0008622
Stsc272789g00001 126 SUPERFAMILY Ribonuclease H-like 56 125 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272789g00001 Stsc-Chr272789 12914 14271 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272789g00001 1 125 Core DNA Replication Machinery Family AT1G08260 50.595 1.27e-37 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272789g00001 K02324 - qsa:O6P43_028502 147.132