Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272787g00004 ATGGCTTCCACAACACCCACCACCACACCTTCCTCTAACAGGAAAGATATTGTTGCAGAGGTTCCTCCATACATCAGAGTTTTCAGTGATGGCACCATGGAACGGTTGATACAAATACCATTTGTGCCACCACTTCTTGATGATCCAAAAACTGGTATCTCTTCCAAGCACATAATCATCTCACACAACCCTCCAATCTCCGCTCGCATTTACCTTCCAAAGCTCACCAATGAAAAAGAGAAGCTCCCCATCCTGGTCTACTTCCATGGCGGTTCCTTCTTCTTGGGATCTCCTTTCTCTCAGTGGTTCCATGACTATATCAACAGTTACCTTGCTCCACAAGGAAAGTTCATAGTGGTTTCCATGGACTATAAGCTGGCACCAGAAAACCCTCTCCCTGCATGTTACCATGATAGTTGGGACGCTCTCTAA 432 0.4583 MASTTPTTTPSSNRKDIVAEVPPYIRVFSDGTMERLIQIPFVPPLLDDPKTGISSKHIIISHNPPISARIYLPKLTNEKEKLPILVYFHGGSFFLGSPFSQWFHDYINSYLAPQGKFIVVSMDYKLAPENPLPACYHDSWDAL 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272787g00004 143 Pfam alpha/beta hydrolase fold 85 143 IPR013094 GO:0016787
Stsc272787g00004 143 PANTHER ARYLACETAMIDE DEACETYLASE 20 143 - -
Stsc272787g00004 143 SUPERFAMILY alpha/beta-Hydrolases 15 143 IPR029058 -
Stsc272787g00004 143 Gene3D alpha/beta hydrolase 24 143 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272787g00004 Stsc-Chr272787 9203 9634 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272787g00004 16 143 Carbohydrate Esterase AT1G19190 42.424 1.33e-27 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272787g00004 - K13258 vum:124847336 178.333