Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272766g00006 ATGGCAAAAACAAGTGTTTGTGGAAGATTGTTGAAGGGAGGGTTTGGAGGAATGTTGGTGATAATGAGGAAACTGAGGACTAGCTTATCACATTCAACAGGGGTGAAACAAGGTCACTTTGTGGTGATTGCAACTCAAGGGTGGAAGCCAGAGAGGTTCTTTGTGAAATTGAGCTATTTGGATCACCCTGAGTTTGTGAAGTTGCTAGAGCAGGCTGAAGAAGAGTTTGGATTCTCTCAGGTGGGAGCATTGGAAATTCCTTGTGAGCCTGGAAAGATGATTAGGTGTTTTGTTGGGAGCATGATAAGAAAGGGTCTGTCAGTATTGTTTGTAGCAAGAAGGTGGACGAGTAGTGTTACTTCATCATCAGAAGAAGAAGTGATGTATTTCAATGATGATGAAACAGTGGAAGGTTATTTCACTGTTCTTGCCACAAAGGGGAAAGAAACAAGAAGGTTCAGCGTTGAGTTAGATTGCTTGAGTGATGGTGCATTCTTGGGGCTTCTTGATGAAGCTCCACAAAACATACATGCTCAAATCCATATCTCATACTAG 555 0.4216 MAKTSVCGRLLKGGFGGMLVIMRKLRTSLSHSTGVKQGHFVVIATQGWKPERFFVKLSYLDHPEFVKLLEQAEEEFGFSQVGALEIPCEPGKMIRCFVGSMIRKGLSVLFVARRWTSSVTSSSEEEVMYFNDDETVEGYFTVLATKGKETRRFSVELDCLSDGAFLGLLDEAPQNIHAQIHISY 184
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Stsc272766g00006 184 Pfam Auxin responsive protein 30 93 IPR003676 GO:0009733
Stsc272766g00006 184 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 24 94 IPR003676 GO:0009733
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Stsc272766g00006 Stsc-Chr272766 11158 14206 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272766g00006 33 89 Calmodulin-binding Proteins AT4G34750 43.860 1.08e-10 55.5
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272766g00006 K14488 - gmx:100795119 124.79