Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272766g00005 ATGGCTAAGTCCTCCTTTGTTGGAAGGATGCAAAGGATGCATAAGGGGATCTCAAACTTAGTGCATCACAGAAGGGCTAAATCACTAAGTTACATTAGTGATGATGATGATGATGAAGATGTTATTAGTAACACTAATAATAATAATGATAACACTAGGGAAGGGTACTTTTCTGTTGTTGCAGAGAAGGGTAGAGAGAGAAAGAGGTTCAGTATTGAGTTGGATTACCTGAATGATCCTGAGTTCAAGGTGCTGCTTGATCAAGCTCAGCAAGAGTATGGTTTCAGACAGAAGGGAGCTCTTTCTGTCCCTTGCAGGCCTCAAGAACTCCAAAAGATTTTGGACGGTGGAAATGAAAGAAGGATCAGTAGGTCATAA 378 0.4074 MAKSSFVGRMQRMHKGISNLVHHRRAKSLSYISDDDDDEDVISNTNNNNDNTREGYFSVVAEKGRERKRFSIELDYLNDPEFKVLLDQAQQEYGFRQKGALSVPCRPQELQKILDGGNERRISRS 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272766g00005 125 MobiDBLite consensus disorder prediction 31 53 - -
Stsc272766g00005 125 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 27 113 IPR003676 GO:0009733
Stsc272766g00005 125 Pfam Auxin responsive protein 15 114 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272766g00005 Stsc-Chr272766 7587 7964 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272766g00005 12 114 Calmodulin-binding Proteins AT3G43120 33.010 5.24e-14 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272766g00005 - K14488 aip:107628081 185.652