Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272754g00004 ATGGGTTTCCGTTTACCTGTAATTCGAAGGACATCATCATTCTCAGCTAGTCAAGCAGCTTCAAAATCTGTGGAAGTCCCAAAGGGGCATCTAGCAGTGTATGTCGGAGAGAAACAGAAGCGGTTTGTGATCCCCATTTCATACTTGAACCGACCTTCAATCCAAGACTTGTTGAGCCAAGCTGAGGAAGAGTTCGGATATGATCATCCTATGGGAGCTGGTATCAGAAGAAAGCTATCATTTAATTCAAACCAAGCATCTTCAAAGGCTTTGGAAGTCCCAAAAGGCTATCTTGCTGTCTATGTTGGAGAGAAGATGAAGCGGTTCATGATTCCCATTTCATATTTGAACCAGGCTTTATTTCAGGAATTACTAAGCCAAGCAGAAGAAGAATTCGGATATGATCATCCAATGGGTGGTCTCACTGTTCCATGCAGTGAGGAAGCCTTCTTGGACCTCACTTCTTGTCTCAATGGACAATAA 483 0.4306 MGFRLPVIRRTSSFSASQAASKSVEVPKGHLAVYVGEKQKRFVIPISYLNRPSIQDLLSQAEEEFGYDHPMGAGIRRKLSFNSNQASSKALEVPKGYLAVYVGEKMKRFMIPISYLNQALFQELLSQAEEEFGYDHPMGGLTVPCSEEAFLDLTSCLNGQ 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272754g00004 160 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 86 157 IPR003676 GO:0009733
Stsc272754g00004 160 Pfam Auxin responsive protein 12 71 IPR003676 GO:0009733
Stsc272754g00004 160 Pfam Auxin responsive protein 77 157 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272754g00004 Stsc-Chr272754 15641 18676 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272754g00004 15 69 Calmodulin-binding Proteins AT3G43120 45.455 1.15e-11 57.8