Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272754g00003 ATGGCTTTCCGCATTCCAGGTATTAGAAAGGCATCACTTTCTGCATCTAAAGGGACTAATGTTCCAAAAGGCTATCTTGCAGTCTATGTGGGAGATAAGATGAGGCGGTTTGTGATTCCTTTATGTTACTTGAATCAGCCTTCATTTCAAGAATTACTAAACCAAGCAGAAGAAGAATCCGGATATGATCATCCAACCGGTGGTCTCACTATTCCATGCAGTGAGGATGAGCGGGAGGCCAATAGAGCTGCAGACTACTTGGCTAAATGGGGGGCTAAAGATGCTAGGAATTATGTGGAGTGGCTTCGTGCTAGACATGAGCTTCATCATGTTTTGGTTGCTGATCTAGCTTAG 354 0.4407 MAFRIPGIRKASLSASKGTNVPKGYLAVYVGDKMRRFVIPLCYLNQPSFQELLNQAEEESGYDHPTGGLTIPCSEDEREANRAADYLAKWGAKDARNYVEWLRARHELHHVLVADLA 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272754g00003 117 Pfam Auxin responsive protein 12 76 IPR003676 GO:0009733
Stsc272754g00003 117 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 14 76 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272754g00003 Stsc-Chr272754 13988 15313 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272754g00003 20 73 Calmodulin-binding Proteins AT3G43120 61.111 8.37e-18 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272754g00003 - K14488 gmx:100777479 127.872