Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272735g00003 ATGAGGGAAATACTTGAAAGGCATCATTTGCACTCAAAGAACCTCTCAAAGCTGGATCAACCCTCTCTTGAATTGCAGTTAGTTGAAAACAGTAACTACACCAAACTTAGCAAGGAAGTTGCTGAGAAGAGCCATAAACTAAGGCAGCTGAGAGGAGAGGATCTTCAAGGCTTAAATATTGAAGAATTACAACAATTGGAGAGGTCTCTTGAAACTGGATTAGGCCGCGTAATAGAAAAGAAGGGAGAGAAGATTATGAGTGAGATCACTGAACTCCAAAGAAAGGGAATGCAATTGGTGGAAGAGAACGAGCGACTAAGGCGTCAAGTGGTGGAGATTACTAATGGCAAAGGGCATCATCATTTTGGTGGTGAATCTGAGATCTTAGTTGGGGAGGAAGGCCAGTCTTCAGAGTCTGTTACAAACGTTTGTAACAACAATAACACCAACAATCATAATGGACCTTCACAGGACTATAATAGTTCAGAAATTTCACTCAAGTTGGGGCTATCATATTCTGGCTAA 525 0.4114 MREILERHHLHSKNLSKLDQPSLELQLVENSNYTKLSKEVAEKSHKLRQLRGEDLQGLNIEELQQLERSLETGLGRVIEKKGEKIMSEITELQRKGMQLVEENERLRRQVVEITNGKGHHHFGGESEILVGEEGQSSESVTNVCNNNNTNNHNGPSQDYNSSEISLKLGLSYSG 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272735g00003 174 Coils Coil 89 109 - -
Stsc272735g00003 174 MobiDBLite consensus disorder prediction 132 162 - -
Stsc272735g00003 174 ProSiteProfiles K-box domain profile. 26 116 IPR002487 GO:0003700|GO:0005634|GO:0006355
Stsc272735g00003 174 Pfam K-box region 30 110 IPR002487 GO:0003700|GO:0005634|GO:0006355
Stsc272735g00003 174 Coils Coil 33 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272735g00003 Stsc-Chr272735 20765 23730 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272735g00003 1 174 MADS-box Gene Family AT2G22540 60.000 5.21e-67 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272735g00003 - - cill:122317082 233.417