Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272730g00001 ATGGCAGCACGTGTTTACAAGATTTCAGAGATTAATCCTACAATAGATAATTTGAGTGTACGTGTACGAGTGATGCGACTGTGGACAATGCTAAGTTATGGAAGTTCTCTGTTACCATATGCAATTGAGATGATATGGCTTGATGAAGATGGAGGAAAAATACATGCCGTGATTAAGAGAAATCTGGTGTCTCGGTTTGTGAATGCATCGAAAGAAGGAGACGCATATCAAATAACTAATTTCGAAGTAAAGCTCAACGGTGGAAACTTCAGGTTTACAAAACATAAGTATGTGATAGATTTGGATCACCGTACTAACGTGCGCCGCCTTCGTGAGTCAAATATTCCACAATATGCATTTAGCTTTGAGGATTTTGACAAGATTAATGCAGTTGGGTCTTTTAAACGGTAG 411 0.3869 MAARVYKISEINPTIDNLSVRVRVMRLWTMLSYGSSLLPYAIEMIWLDEDGGKIHAVIKRNLVSRFVNASKEGDAYQITNFEVKLNGGNFRFTKHKYVIDLDHRTNVRRLRESNIPQYAFSFEDFDKINAVGSFKR 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272730g00001 136 Pfam Domain of unknown function DUF223 44 128 IPR003871 -
Stsc272730g00001 136 Gene3D - 4 112 IPR012340 -
Stsc272730g00001 136 CDD RPA1_DBD_A_like 19 107 - -
Stsc272730g00001 136 SUPERFAMILY Nucleic acid-binding proteins 5 108 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272730g00001 Stsc-Chr272730 17969 19023 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272730g00001 2 128 Core DNA Replication Machinery Family AT2G06510 26.923 1.37e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272730g00001 - - adu:107465235 154.066