Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272724g00004 ATGAGAACTCAACGCCCTCACCTTCTCTTCCTCCTCTCCCTCCTCTTCTTCACAACCACATTCTCCAATCTACATCCCAAGGTCTTCGCCGTTTACGACATCGAATCTCCCGCCGCACCCGCAGTCGACGACGGCGATGCCACCTTCATCCGAACCAGCTGCAACGGCACTCTCTACCCGGACGTCTGCTACACCTCCCTCTCTCGCTACGCCAATGCGGTCCAGCAGGATCCCGGCCAGCTTGCGCGCGTCGCCATCGCCGTCACACTCTCCAAGGTCCACCGCACCGCCTCCTACGTCTCCAACCTCACTCGCGACGCCGATTACACCGTCGACACGCGCGCAACCTCCGCGCTCCATGACTGTTTCACGAATCTCGATGACGCCGTCGACGAAATCCGCGGCTCGCTGAAGCAGATGCGGCAAATTGGAGCCGCCGGAACCGGCGCGGAGTCGTTCCTGTTCCAGATGAGCAACGTGCAGACGTGGATGAGCGCGGCACTCACCGACGAAGAGACATGTACGGACGGATTCCAGGATGTGGCGGACTGTCCGGTGAAGGCGGAGGTGTGCGACCGCGTCACGAAGGTGAAGCAGTTCACGAGCAACGCTTTGGCTCTCGTCAATGGCTACGCTAACAAGGGAGCGCCGTAA 654 0.607 MRTQRPHLLFLLSLLFFTTTFSNLHPKVFAVYDIESPAAPAVDDGDATFIRTSCNGTLYPDVCYTSLSRYANAVQQDPGQLARVAIAVTLSKVHRTASYVSNLTRDADYTVDTRATSALHDCFTNLDDAVDEIRGSLKQMRQIGAAGTGAESFLFQMSNVQTWMSAALTDEETCTDGFQDVADCPVKAEVCDRVTKVKQFTSNALALVNGYANKGAP 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272724g00004 217 Gene3D Invertase/pectin methylesterase inhibitor family protein 45 211 IPR035513 -
Stsc272724g00004 217 SMART PMEI_2 45 207 IPR006501 GO:0004857
Stsc272724g00004 217 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 49 209 IPR035513 -
Stsc272724g00004 217 FunFam Pectin methylesterase inhibitor 1 45 211 - -
Stsc272724g00004 217 Pfam Plant invertase/pectin methylesterase inhibitor 49 207 IPR006501 GO:0004857
Stsc272724g00004 217 PANTHER PECTINESTERASE INHIBITOR-LIKE 9 207 - -
Stsc272724g00004 217 CDD PMEI-like_3 52 213 - -
Stsc272724g00004 217 NCBIfam pectinesterase inhibitor domain 8 211 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272724g00004 Stsc-Chr272724 15235 16216 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272724g00004 2 210 Carbohydrate Esterase AT5G53370 27.830 2.37e-16 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272724g00004 - - gmx:100812251 319.701