Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272689g00007 ATGAATGTGTTGAAGCAAAGTAGCCAATTACTCTTCATCTCTAGCATTCTAATTTTCCTTGTTCTCCCAAGTCTAGTTGCGTCCGAATGCACCTGTGATCAATCGTCAGAAGAAGTTCACGACAAAGCCAAGGCCACAAAACTCAAAATAGCTGCTCTTGTATCTATTCTAATAGCCAGCACAATTGGTGTTTGTATCCCATTTCTCGGTAAAATCATACCTGCCATAAGTCCAGAAAAAGACATTTTTTTCTTAATCAAGGCTTTCGCGGCGGGTGTCATATTGGCAACTGGTTTCATTCATGTGTTGCCTGATGCATTCGAGAATCTAACCTCACCTTGTTTGGGCGACCATCCTTGGGGAGATTTTCCTTTCACCGGATTTGTGGCAATGTGCACTAGTATAGGAACTCTTATGATTGATGCTTATGCCACTGCTTATTTTCAAAAATCAAATCTCCAAAAAACACAGGTGGAAGCTCTCACAGATGCGGAGAGAGGAGAACATGTAGAGAATACGGACGTGAATACTCACTCACACGGAACACATGGTCATGCACATGGACTTGCTCCGAGCAAGTCTTCAGAACTTCTTCGTCATCGAGTTATATCGCAGGTATTGGAGTTGGGGATTGTTGTCCATTCCGTGGTAATAGGGATTACTTTGGGAGCATCAATGAGTTCAGAAACAATAAGACCACTCGTTGGTGCCTTGACTTTTCATCAGTTCTTTGAGGGTATGGGACTTGGAAGTTGCATAACTCAGGCAAAATTTAGAAGACTATCTATTATAATCATGGGATTGTTCTTCTCTCTTACTACACCAATAGGAATTGCAATTGGTATAGGGATCTCAAGTGTTTATGATGATAACAGTCCAACTGCCCTTATTGTTGAAGGAGTTTTCAACGCAGCTTCAGCTGGGATTCTAATCTATATGGCACTTGTAGATCTTCTTGCAGCTGATTTTATGAATCCAAGAATGCAGAAAAGTGGTAGACTTCAAATAGGGGCAAATATATCTCTTCTTTTAGGAGCTGGTTTTATGTCTCTTATTGCTAAATGGGCATAA 1071 0.409 MNVLKQSSQLLFISSILIFLVLPSLVASECTCDQSSEEVHDKAKATKLKIAALVSILIASTIGVCIPFLGKIIPAISPEKDIFFLIKAFAAGVILATGFIHVLPDAFENLTSPCLGDHPWGDFPFTGFVAMCTSIGTLMIDAYATAYFQKSNLQKTQVEALTDAERGEHVENTDVNTHSHGTHGHAHGLAPSKSSELLRHRVISQVLELGIVVHSVVIGITLGASMSSETIRPLVGALTFHQFFEGMGLGSCITQAKFRRLSIIIMGLFFSLTTPIGIAIGIGISSVYDDNSPTALIVEGVFNAASAGILIYMALVDLLAADFMNPRMQKSGRLQIGANISLLLGAGFMSLIAKWA 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272689g00007 356 PANTHER ZINC/IRON TRANSPORTER 45 350 - -
Stsc272689g00007 356 Pfam ZIP Zinc transporter 47 353 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Stsc272689g00007 356 NCBIfam ZIP zinc/iron transport family 34 356 IPR004698 GO:0005385|GO:0016020|GO:0071577
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272689g00007 Stsc-Chr272689 19204 24306 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272689g00007 7 356 Inorganic Solute Cotransporters AT3G12750 53.090 1.06e-128 371
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272689g00007 K14709 - gmx:100789557 479.559