Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc272678g00001 | AACCAATCCCATCACCATTTGCAACACCTCTCGTCAGCAAGGGTTTCCATATTGGAAAGAGGGTTGAGTAAAATTGAGAACAAGTATACTCTGAAACTCAAGTGCTTTGGCAATGGGATGGGTGATGATGGATATAAGTGGAGGAAGTATGGTCAAAAATCTATTAAGAATAGCCCAAATCCTAGGAGCTACTATAGATGCACCAATCCAAGGTGCAGTGCAAAGAAGCAAGTTGAGAGATCCAATGAGGACCCAGACACACTTATAATCACATATGAAGGTCTTCACTTGCACTTTGCATACCCACATTTTCTCACAGGACAACCACAACCGTCGCAATCACAATCAGATCCTCCAATCAAGAAGCCCAAGCCAACGCCAACACCTTCACCACAAAATAAATCGCAACACATTCTAGAAGCTAAGGATGACGTCCAAGCTAACCTAACTACTTTGGGCCCAATACAAACCACTTTAATGGGCTCTCAAGAAGATGTGGCCCAATTTAATTTGGGCTCACAAGGGCTTCTTGAGGACATGGTGCCATTCATGGTTAGGAACCCCCATAACAGTGCCAATAGCACTCACTCACTTTTCTCTTGTTCTTCTCCACATTACTCAACAACATCCTGTTATACTGTTGGCTTGAACTTTAGCAATTAG | 663 | 0.4299 | NQSHHHLQHLSSARVSILERGLSKIENKYTLKLKCFGNGMGDDGYKWRKYGQKSIKNSPNPRSYYRCTNPRCSAKKQVERSNEDPDTLIITYEGLHLHFAYPHFLTGQPQPSQSQSDPPIKKPKPTPTPSPQNKSQHILEAKDDVQANLTTLGPIQTTLMGSQEDVAQFNLGSQGLLEDMVPFMVRNPHNSANSTHSLFSCSSPHYSTTSCYTVGLNFSN | 220 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc272678g00001 | 220 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 26 | 128 | IPR044810 | GO:0003700 | |
Stsc272678g00001 | 220 | SMART | WRKY_cls | 41 | 100 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Stsc272678g00001 | 220 | MobiDBLite | consensus disorder prediction | 116 | 130 | - | - | |
Stsc272678g00001 | 220 | FunFam | WRKY transcription factor | 28 | 102 | - | - | |
Stsc272678g00001 | 220 | Gene3D | WRKY domain | 37 | 94 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Stsc272678g00001 | 220 | ProSiteProfiles | WRKY domain profile. | 36 | 101 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Stsc272678g00001 | 220 | MobiDBLite | consensus disorder prediction | 104 | 135 | - | - | |
Stsc272678g00001 | 220 | SUPERFAMILY | WRKY DNA-binding domain | 39 | 98 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Stsc272678g00001 | 220 | Pfam | WRKY DNA -binding domain | 42 | 98 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc272678g00001 | Stsc-Chr272678 | 10573 | 14634 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc272678g00001 | 5 | 187 | WRKY Transcription Factor Family | AT5G43290 | 44.560 | 4.72e-42 | 142 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Stsc272678g00001 | WRKY | 3.4e-26 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc272678g00001 | - | - | aip:107637904 | 330.487 |