Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272669g00002 ATGGCGTGGAAGGCTAGCGGTTTGCAAAATGTTGAAGACGAGCTAAAACTTTGTAAAGATGAGTTTCGTATAGCTGAAGAAACCATCAAAAGCTTGACAATTGACAAATTGATTTTGGAGCAAAGGCTGTCTAGACTTGAGAAGAAAAATTCTGAAGAGAATTCTTCTATTCAACTGAAACTTGAACAAGAACGCAAAACTCTGAAAGGTCAAGTTTATGACCTCGAAAGAAAAGTAGAAGTATTGAGACAAGAGTTAGTTGCTGCTGAGTCTACACTTTCAGTCAAGGACTCTGAATTGACTGCACTGAAGAACAATTTGAGAGAGCTTGAAGAATTGAGAGAAATGAAAGAGGACATTGATAGAAAGAACAAGCAAACAACTGCCATATTGAAGATGCAAGCATCTCAATTAGCTGACATGGAGTTGCTTTATAAGGAAGAACAAGTTTTAAGGAAGCGATATTTTAATACGATAGAAGATATGAAAGGCAAGATAAGAGTTTCCTGTCGGCTAAGACCTCTAAGTGACAAAGAGATTGCTGAGAAAGATGGAAATTCTCTTACTACTGTAGATGAGTTTATTGTTGAGCATCAATGGAAAGATGATAAACCAAAACAACACATATATGATCGTGTGTTCAATGGCAATGCCACTCAAGAAGATGTATTTGAGGATACAAGGTGCAGTACTTGGTGCAATCGGCAGTAG 711 0.3741 MAWKASGLQNVEDELKLCKDEFRIAEETIKSLTIDKLILEQRLSRLEKKNSEENSSIQLKLEQERKTLKGQVYDLERKVEVLRQELVAAESTLSVKDSELTALKNNLRELEELREMKEDIDRKNKQTTAILKMQASQLADMELLYKEEQVLRKRYFNTIEDMKGKIRVSCRLRPLSDKEIAEKDGNSLTTVDEFIVEHQWKDDKPKQHIYDRVFNGNATQEDVFEDTRCSTWCNRQ 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272669g00002 236 Coils Coil 8 56 - -
Stsc272669g00002 236 Pfam Microtubule binding 146 229 IPR031852 GO:0008017
Stsc272669g00002 236 PANTHER KINESIN-LIKE PROTEIN KLP-3 39 228 IPR027640 GO:0003777|GO:0007018
Stsc272669g00002 236 ProSiteProfiles Kinesin motor domain profile. 165 236 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc272669g00002 236 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 123 227 IPR027417 -
Stsc272669g00002 236 Coils Coil 58 130 - -
Stsc272669g00002 236 Gene3D Kinesin motor domain 106 232 IPR036961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272669g00002 Stsc-Chr272669 10609 11966 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272669g00002 8 228 Calmodulin-binding Proteins AT5G65930 60.633 1.30e-74 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272669g00002 - - gmx:100782701 338.191