Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272661g00003 ATGAGTATGGAGAAATCCTTCAGCTTTTCATCGTATCATTTCAGCGCTCCTCCGAGACACAGCAGAGACAAGGATTCTGAAGCTTCATCATCTAATCGCGGCCACCACCAATGGAAATCATCAGGAGGAGAGGAGGATCTTCAACCCGAAGACCACGACTCCATCCTCCGAGTTTCGGAGGATGTGGATCGTTTCCTTGAAACCAGTGCCACCACTCCTCCTCTTCTCCAAGTCCCTGATTGCATCCCACAACTAGCAAAGATCTTGGATTCCATGGTGTATAGATACAACACCGGTAAAAGAAAGTTCGGCAAAGACGAAGAAAATGATGAATTGTTTCTGGCCGTTGTTGATCGCATCTCGAAGATCTCTGCTATTCTCTCTACCTTCCCTTGTGATCCCTCTGCCTTCGACAAAACTACCTTCTCCCTCGAGAAAGCAATGTCTTTCTTGGAGAAACATCTCTGCACTATTTTGCAGGATCCAAAGTCCTCCACCGCCTCCGCCACCCCTACCACTCACTACCACGGCGATTTTCAATCCAATTCCAAACCCAAACCCCCTAAGAAATCATCCTCTTTCGATTCTCTCACTCAAATTCAAGATGAACTCTGTTCTACCTGTGTTCTCGAAAATCTCAATCATCAGGTTCAAAATCAAGATCATGATCAAGATTCATCAAATAGTAACCAGTACTTCCCGGCATTCCCCCAGCACAAAGTCTCCCTCATGAACAAGATCGCCACCGCCATGATCGCCGCGGGATATCAAACCGAGTATTGCGTGGCCTTCGCCAGCTTCAGGCGGATCGCGTTCAAGACCGCGCTGCAAGAATTCGGTTACGCGAGCGTCGGCATGGAAGAGATCCATAAAATGCAGTGGGAAGTCTTGGAAGGAGAGATCGCCACGTGGAACAACACGGTTCGACATTGCGTAACCGTCTTGTTCAACGGAGAACGCAAGCTCTACAACTCAGTCTTCTCAAATCAACAATCCATCATATCTCAAAACCTCTTGAGCGATCTCGCACGCGCCGTGATCATTCATTTCCTGAACTACGCACAAGGCGTGGTGCTAACATTGCTAACCGTCGAGAAGCTTTTCAAGTTCCTTGACATGTATGAAACACTAAGGGATGTGGTGGAGCCCGCCATCGCGAATGGCGGTTCTTACCTTGAGAGGTGCAAGAAGGAGCTAGCACAAGAGATAGCCACCACCAAGATTCGAATAGTGGAATCTACGGTGGCCATGTTTCGTGACCTAGAAAATTCCGTTAAGGGCGACAGCGAGAGGGTTCCGATTCCCAACGGTGCAGTTCACCCGTTAACACGCTATGTTGTGAATTATCTTGAATATGCTTGCGAGTACAAGGAAACATTGGAACAGGTGCTACGGCAATGCCTTCACGATGATAAAAAAATTGAGCTAGAGCAAGACGAAGAGACTCCCAAGAAATCTTACTTGGGGACTCGGTTAATGACAATCATGGACTTACTCAACTTGAATCTTGAAAATAAGTCTATGCTGTATAAGGATTCTGCTTTGAGATGGGTTTTCTTGATGAATAATGGGAGGTACATAGTTCAGAAGGTGAAAGGGTGCAAAGAGCTTCACCAATGCATGGGTGATGATTGGTGTAGAAAGAGGCAATCATGGTTAAAACTGTACCATAAAAATTACCGGAAAGACACATGGTCTAAGGTGTTGCAGTGCCTTAACCCAGATGGATTGCAAGGAAACATTAGTGTGGTGAGTCCCAAAGACAACAACAAAGATAAAGTGTCGAAACAAATGCTAAAAGATAAGTTTAAGAGTTTCAATAGCACGTTTGAAGATATATACAAAACGCAGAGCTCTTGGGTGGTTAGTGATGAACAGCTTAAGTCTGAGCTCAGGGCTTCAATTGCTGCTTTGGTGATCCCAGCTTACAGATCATTTTTTGGAAGATTCAAGCACCATTTACAGTCCAGTAGACATGTTGACAAGTATATTAAGTATCATCCTGAAGATATTGAGGCTTTAATTGAAGAACTTTTTGATGGGATTGCTAAAACCTTGCCTAAAAGGAGATCGTGA 2076 0.4513 MSMEKSFSFSSYHFSAPPRHSRDKDSEASSSNRGHHQWKSSGGEEDLQPEDHDSILRVSEDVDRFLETSATTPPLLQVPDCIPQLAKILDSMVYRYNTGKRKFGKDEENDELFLAVVDRISKISAILSTFPCDPSAFDKTTFSLEKAMSFLEKHLCTILQDPKSSTASATPTTHYHGDFQSNSKPKPPKKSSSFDSLTQIQDELCSTCVLENLNHQVQNQDHDQDSSNSNQYFPAFPQHKVSLMNKIATAMIAAGYQTEYCVAFASFRRIAFKTALQEFGYASVGMEEIHKMQWEVLEGEIATWNNTVRHCVTVLFNGERKLYNSVFSNQQSIISQNLLSDLARAVIIHFLNYAQGVVLTLLTVEKLFKFLDMYETLRDVVEPAIANGGSYLERCKKELAQEIATTKIRIVESTVAMFRDLENSVKGDSERVPIPNGAVHPLTRYVVNYLEYACEYKETLEQVLRQCLHDDKKIELEQDEETPKKSYLGTRLMTIMDLLNLNLENKSMLYKDSALRWVFLMNNGRYIVQKVKGCKELHQCMGDDWCRKRQSWLKLYHKNYRKDTWSKVLQCLNPDGLQGNISVVSPKDNNKDKVSKQMLKDKFKSFNSTFEDIYKTQSSWVVSDEQLKSELRASIAALVIPAYRSFFGRFKHHLQSSRHVDKYIKYHPEDIEALIEELFDGIAKTLPKRRS 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272661g00003 691 PANTHER EXOCYST COMPLEX PROTEIN EXO70 70 681 IPR004140 GO:0000145|GO:0006887
Stsc272661g00003 691 MobiDBLite consensus disorder prediction 1 15 - -
Stsc272661g00003 691 Pfam Exo70 exocyst complex subunit 303 677 IPR046364 GO:0000145|GO:0005546|GO:0006887
Stsc272661g00003 691 SUPERFAMILY Cullin repeat-like 104 680 IPR016159 -
Stsc272661g00003 691 MobiDBLite consensus disorder prediction 17 50 - -
Stsc272661g00003 691 MobiDBLite consensus disorder prediction 1 50 - -
Stsc272661g00003 691 MobiDBLite consensus disorder prediction 163 194 - -
Stsc272661g00003 691 Gene3D Exocyst complex component Exo70 88 689 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272661g00003 Stsc-Chr272661 12590 14724 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272661g00003 35 690 EXO70 exocyst subunit family AT5G13150 40.490 1.13e-169 499
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272661g00003 K07195 - adu:110275432 1040.02