Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272655g00005 ATGGCGGAACTACTCATCCACATGGCAGTTGATTTCTTGTATAGTGCAGAATCTCCAGTGCTGGTGGATAAAAGTGTGTCATTTAGGCTAAAAAAGATCTTATCTTATTTAGAGCAAGTAGCCATTATTACGACAGACTTGGAGTCCCGTCAATTCAGTAACCAAGAAGTGAAGAATTGGCTGATAAGTCTTAAACTTGCAGGCTACAACATCTTAGATGAGTTGGAGAAATTCAAACTTCAAGGCCATCGTGTTTCATTTCTAAATCCTCGACGACCGAAATTCAAAGAGGACGTCATAACTGAATTTGAAAATTTACTAAGCAAATTTGAAAATTTACTAAGCAACTACGATCAGTTGGGACTACATAAACCAGAATTGAATCAGCGTATGTTAGACGAGTATCTAATTCATCCTCCTCGTTATCCCCATTACAGCATAGGCGGTCGTGATGATGAATGTGCAGCTTTAGTTGAGATGTTGCTGAACACGGTTGGTCAAGAAGGTCGTATCAAATACATATCAATTGTTGGAGGGGTTGGAACAGGAAAGACTGCATTGGCACAACTTGTGTACGAAAATCAAAATGTGAAAAGTCATTTCCATTTATTGAGTTGGATTGGCGTCCCAAACAACATGAGCCTGTCAAGCACTGCTGGGTTCTTGTTGAGTAGTTTCACAGGTGAGCTTGTGCAAGATCAGCTTGGGTTGGAAATTTTGTTTCAGAAGATCGTTCACATTATTAGCGACAAAAGGTTCCTTTTTGTTCTGGACAACGTTTGGAGCAAAGATTGTTACGTGTGGGAACAGCTAAGGAACCTCTTCAGTTTTGGGGCTCCTGGGAGTACAGTTCTTGTAACGACGCGCAAGATGGCGGTTGCACGAGCAGCAGGATCCAGAGATGCAGAAGACATCTATCATCTGAGTCCTCTATCAGATCGAGATTGTTGCTCTATTGTCTGGAACAGAGCATCCACAATCTTAGATCGTGTGTCAGATCCAGAGAAGTTTTTCCACGAACATGGCGCAGTTGTTGCACAAAGGTGTCTTGGGGTTCCTCTTAAAGCAAAAATTCTTGGTGATATTTTGGTTGGCCGATATTCAGATATAGAAACTTGGAGAAGTGCGATAGAAAGCTCTGATCCGTGGAGTTCAGAAGAATATAAGCAGATATTTATGAAGGAGGAGGCGGAAGAAGAAGATGAAGAACAGAATTTGGGGTTCAACTTTTATGCGATTAGAAATGAGTGGGAGAACAGAGCAAGACAACCTACAACGTCTTTGGTTCCTGCTGCAACAATACATGGCCGAGATGGTGAGCAAGAATCTTTGATTGCAGGGTTTTTTGACAATGCTGAAGCCCAAGTTATTCGAGTTATTTCTATTGTAGGAAAAGCTGGAATTGGAAAGACTGCTCTAGCCCAACTTGTTTTCAACAGTGAACATGTGAGGCAACATTTCGATTTAATGAGCTGGATATATGTCTCAGAGATATTCAATCTGAAACACATTGCTACTGCCATGTTGGAATGTTTCAGGTTAGAACCGATGCATGATTTGCTTGAACTAGAAATCTTGTTTCAGCGAATCCGTCACACTATTATGGGAAAGAGATGCCTTTTCGTTTTAGACCATGTTTTGTGCAAGATTAATTCCAAGTGGGAACAGCTGGTGAACCTTGTCAGATATGGAGCCCCTGGAAGTACTATTTTGATAACCACACGCAAGGAGGAAGTTGCAAGAGCAGCAGGATCCAATGAGGCAGACATCGTTCATCTGACAAACCTTTCAGAGATGGATTGTTTGTTAATCATTGAGGACGAAGCATCCATTACCTCCGATCCAGCAGTGTTCTCCGGCGATATTTGTAGAGGTATCACATTGAAGTCTCGGAGGATGCCATATGTTGCAAAATATCTTTGTTCTGTTTTGCGTGGCAGAGCTGTTTTGGGGGGACAGAGACAATTATTAGAAAGCTATGTCCCAGAACCAAGTAAATATGAAGACCCGTTTATGGAAGGAGAAAAAGAACCGGAGGAAATAGAAAGGCCACCTACGACTTCTGTGGGTACAGCAAGAATACATGGCCGAGATGAAGAAAGAAAAACCTTGCTTCAAATGCTACTGAGCCAATATGGTCTGACTTCCAAGTGTATTTCTATTTTTGGAAGAGCTGGAATAGGGAAGACTGCACTGGCCCAAATTGTTTACAACGATGACATGGTGTTGGAATATTTTGATTCCAGGGCATGGGTATACCTGGGTAAGGAAGGCGATCTAAAACAGATCTTGAAGGCCATCATGGAGAGTTTGACTTCTGATCGATTCATTCACACCGAATTGGAAGTACTGAAACAGAGATTTTGTGAAATGGTTAAGTTTAAGAGATGTCTTTTTGTTATAGACGATGTATGGCTTGAAGATCCTCATCAGTGGCAAGATGTAATGGCGTGCTTCATTTTCTGTGTACCAGGAAGTAAAATTTTGATAACCACACGAAATGAAAGATGTGCAAAATCGATATCTCCACACAGAGACATCCACCGTATCGGTGATCTTTCTGAGGAGGCATGTTGGTCAATTCTCAAAGAATATGCATTTCGTCGTTCAGTCAGTAAGTCAGAAGAAGAAATGTTTTACAAGGAAGTAGGAAAGGACATTGCAATTAAATGCGCAGGGGTGCCGCTTGTTGCGAAATCTATTGGCAGTATCTTGCGTGGCAAGAATACCATACAAGAATGGCAAAAAGTATTGACGGGTGATGTATGGCATTCAACGGACTTGATGTCTTCGCTGATGTTAAGCTATCTTTCGATACCACCTGAATTGAGACAGTGCTTACTGTATTGTTCAATCTTTCCTACGAACCACTCCATAGAGGCAGACAAATTAATCAAACTATGGATGGCTCAAGGATTTCTTATTTCTTCACGAGTTGGAAATCATTATGAAATGGAAAGGGGATGGGAGTACCTTAATTACATGATACAGCGATGCATCTTTCAAGATTTGTATCAGGACGGTCATGGTAACTTGATGTGCAAACTTGAGAGCGGAATGAGCGACTTGATCCATCTTCTTGCAAAAGAAGAATCCATCATACTGCCTATTGACTACAAGAAGATGCTTCAAGAGAGTGAGCAGCCTCAAAATAATGATGATTCGCCGGAATACCGTCATTGCACCTTAAGTATTGTAGAACAATCTTCTTTGCCGAAGTCCATTGCCAATGCAAGGAAACTACACACATTGATGATTTTGTCTGAGTATTTCTTTCCAGATCCAAGGAGCCTTGTTAATCTATTGAGTCATTTGAAGATGATCAGGGCATTATCCTTGAGCTCTTGTTTGATAAAAGAGCTTCCATCAAAAGTAGGGGAATTGCTATTTCTAAGGTATCTCGACTTATCTTTCAACCGTGATTTAAAGAAGCTGCCGAAATCTATTTGCAGCTTGCTTAATTTGCAAACTCTGAATCTCAATGGATGCGATAGCCTTCGAAAACTGCCAAAAGATATAGGAAAACTAATCAAGCTATGGCATCTTGAGATTCTTTGGACGACAAGTCTTAGCTACTTGCCAAAAGGAGTTGCAAGTTTAATTTTCCTCAGAACATTGAGCCGTTTCATTGGGAGCAGTGCAGCCGGTAGCAAAGCATGCAATCTTGGAGATTTGGGAATGCTAAACAACATTGAAGGGTCCATCACCATAGATGGTTTGGGAGGTAAAACTAGTACTTCTGAAGCTTCAAAAGCAGGTTTGAAAAATAAGAAAGGCCTGCAAGGCCTGGAACTGTGCTTTTCGGCTGTTGGATCAACGAGTACAGAGGACGAATGTGTGCTTAAAGTCTTGGAAGCACCTCCTCAATTGCAATGCCTTCAGATACTTTTTTACCGGGGAGAGTTGTTCCCTGCTTGGATGACAGCAATGCAGTGTTTAAGGCATCTGATGCTTGCCCATTGTAGTGAATGCGAATATTTGCCCCCTCTTGGGCAACTGCGAGCCCTTGAATCACTTGAGATAAAGGATATGCCTAAGGTGAAGACGATGGCTTCTGAGTTTTTAGGTGTCTCACTGGACAATGCTGATCGTGGTGAGGAAGGTCCCTCTTCAATAGTTGCATTTCCCAGTTTGAAAGCGCTTCGCTTTGAAACTTTGAATGGCTGGGAAGAGTGGTTTAGTGATGATGACACAAATGTAGAAGTCATGCCTTTACTTTTGTCTTTGGTAATTGAAAACTGCCCGAATCTAAGGGAACTTCCAGAATACATAAGGGTGAAGCAAAATTTGAAACTTGACATAAAGAAATGTCCTCCTCTGGAAGCAACTTCAGCGAATGCAGGTCAAGATTAA 4353 0.4151 MAELLIHMAVDFLYSAESPVLVDKSVSFRLKKILSYLEQVAIITTDLESRQFSNQEVKNWLISLKLAGYNILDELEKFKLQGHRVSFLNPRRPKFKEDVITEFENLLSKFENLLSNYDQLGLHKPELNQRMLDEYLIHPPRYPHYSIGGRDDECAALVEMLLNTVGQEGRIKYISIVGGVGTGKTALAQLVYENQNVKSHFHLLSWIGVPNNMSLSSTAGFLLSSFTGELVQDQLGLEILFQKIVHIISDKRFLFVLDNVWSKDCYVWEQLRNLFSFGAPGSTVLVTTRKMAVARAAGSRDAEDIYHLSPLSDRDCCSIVWNRASTILDRVSDPEKFFHEHGAVVAQRCLGVPLKAKILGDILVGRYSDIETWRSAIESSDPWSSEEYKQIFMKEEAEEEDEEQNLGFNFYAIRNEWENRARQPTTSLVPAATIHGRDGEQESLIAGFFDNAEAQVIRVISIVGKAGIGKTALAQLVFNSEHVRQHFDLMSWIYVSEIFNLKHIATAMLECFRLEPMHDLLELEILFQRIRHTIMGKRCLFVLDHVLCKINSKWEQLVNLVRYGAPGSTILITTRKEEVARAAGSNEADIVHLTNLSEMDCLLIIEDEASITSDPAVFSGDICRGITLKSRRMPYVAKYLCSVLRGRAVLGGQRQLLESYVPEPSKYEDPFMEGEKEPEEIERPPTTSVGTARIHGRDEERKTLLQMLLSQYGLTSKCISIFGRAGIGKTALAQIVYNDDMVLEYFDSRAWVYLGKEGDLKQILKAIMESLTSDRFIHTELEVLKQRFCEMVKFKRCLFVIDDVWLEDPHQWQDVMACFIFCVPGSKILITTRNERCAKSISPHRDIHRIGDLSEEACWSILKEYAFRRSVSKSEEEMFYKEVGKDIAIKCAGVPLVAKSIGSILRGKNTIQEWQKVLTGDVWHSTDLMSSLMLSYLSIPPELRQCLLYCSIFPTNHSIEADKLIKLWMAQGFLISSRVGNHYEMERGWEYLNYMIQRCIFQDLYQDGHGNLMCKLESGMSDLIHLLAKEESIILPIDYKKMLQESEQPQNNDDSPEYRHCTLSIVEQSSLPKSIANARKLHTLMILSEYFFPDPRSLVNLLSHLKMIRALSLSSCLIKELPSKVGELLFLRYLDLSFNRDLKKLPKSICSLLNLQTLNLNGCDSLRKLPKDIGKLIKLWHLEILWTTSLSYLPKGVASLIFLRTLSRFIGSSAAGSKACNLGDLGMLNNIEGSITIDGLGGKTSTSEASKAGLKNKKGLQGLELCFSAVGSTSTEDECVLKVLEAPPQLQCLQILFYRGELFPAWMTAMQCLRHLMLAHCSECEYLPPLGQLRALESLEIKDMPKVKTMASEFLGVSLDNADRGEEGPSSIVAFPSLKALRFETLNGWEEWFSDDDTNVEVMPLLLSLVIENCPNLRELPEYIRVKQNLKLDIKKCPPLEATSANAGQD 1450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272655g00005 1450 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 128 388 IPR027417 -
Stsc272655g00005 1450 Gene3D - 852 935 IPR042197 -
Stsc272655g00005 1450 MobiDBLite consensus disorder prediction 668 683 - -
Stsc272655g00005 1450 Gene3D Ribonuclease Inhibitor 1243 1441 IPR032675 -
Stsc272655g00005 1450 Gene3D Ribonuclease Inhibitor 1056 1214 IPR032675 -
Stsc272655g00005 1450 MobiDBLite consensus disorder prediction 667 691 - -
Stsc272655g00005 1450 Pfam NB-ARC domain 702 918 IPR002182 GO:0043531
Stsc272655g00005 1450 Pfam NB-ARC domain 158 381 IPR002182 GO:0043531
Stsc272655g00005 1450 Pfam NB-ARC domain 452 647 IPR002182 GO:0043531
Stsc272655g00005 1450 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 420 647 IPR027417 -
Stsc272655g00005 1450 Gene3D - 419 591 IPR027417 -
Stsc272655g00005 1450 Gene3D - 686 848 IPR027417 -
Stsc272655g00005 1450 Gene3D - 129 301 IPR027417 -
Stsc272655g00005 1450 PRINTS Disease resistance protein signature 718 733 - -
Stsc272655g00005 1450 PRINTS Disease resistance protein signature 891 905 - -
Stsc272655g00005 1450 PRINTS Disease resistance protein signature 1150 1166 - -
Stsc272655g00005 1450 PRINTS Disease resistance protein signature 791 805 - -
Stsc272655g00005 1450 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 689 950 IPR027417 -
Stsc272655g00005 1450 SUPERFAMILY L domain-like 1056 1438 - -
Stsc272655g00005 1450 Gene3D - 936 1030 IPR036388 -
Stsc272655g00005 1450 PANTHER DISEASE RESISTANCE PROTEIN RP 436 646 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272655g00005 Stsc-Chr272655 14110 19196 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272655g00005 1108 1206 WRKY Transcription Factor Family AT4G12020 37.374 5.51e-10 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272655g00005 - - adu:127744823 952.199