Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272649g00003 ATGAAATGGAACCACCACAAAATGCAACAACAGAAACAGCAACAGAAGCAGAAGCTGTTGGATGAGGAGGAGGAGCAACGGGTGGAAGATGAGTCTCCCAAAACGATGGCATTTCATTTGGTTCCATGTGCCAAGACCTCATCTTGCTCCTTTCTTGCTGCTTCTGTTGCGGTGGTGGAAGAATTTTATTACATTACCGACAACACATACTTCAAAGAAGAGGTTTTGCAAAAGGAATTTGCTGTCTTGAATTATCTAAAGTTTGAAATGTCAGCTCCAACAATCAAGTGTTTCTTGAGGAGAATAGGAATTGAGGCCAATGAAAGAGCTAACGTCCAATGA 342 0.4181 MKWNHHKMQQQKQQQKQKLLDEEEEQRVEDESPKTMAFHLVPCAKTSSCSFLAASVAVVEEFYYITDNTYFKEEVLQKEFAVLNYLKFEMSAPTIKCFLRRIGIEANERANVQ 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272649g00003 113 Coils Coil 5 29 - -
Stsc272649g00003 113 Pfam Cyclin, N-terminal domain 51 91 IPR006671 -
Stsc272649g00003 113 MobiDBLite consensus disorder prediction 16 32 - -
Stsc272649g00003 113 SUPERFAMILY Cyclin-like 48 90 IPR036915 -
Stsc272649g00003 113 MobiDBLite consensus disorder prediction 1 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272649g00003 Stsc-Chr272649 21623 22584 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272649g00003 59 101 Core Cell Cycle Gene Families AT1G44110 79.070 1.44e-17 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272649g00003 K06627 - egr:104450526 79.7221