Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272643g00003 ATGGCTCCCTCTGACCAACCTCGCCACTCTCTTATCCCCTCTTTCCTTTATTCACCAAAAGCGTTGTCCTCTCTTTCATCATCATCATCACCACCCCCCTCAGGCTCAGAGGGTAGCAATGGTAATAATAATTTTATGATCCCTGCACCAAAAGAGGCTATTCCCTTGTATTCTTCTGCTTACTACATGGCATGCAGCTTTGGTGGCATATTCAGCTGTGGCCTCACTCACATGTCTGTCACTCCTCTCGATCTCGTCAAGTGCAACATGCAGATTGATCCTGTAAAGTACAAGAACATATCATCAGGATTCGGAATTCTGATGAAGGAGCAAGGAATGAGAGGGTTCTTCAGGGGTTGGGTCCCAACACTGCTTGGGTACAGTGCCCAGGGAGCATGCAAGTTTGGATTCTATGAATTCTTCAAGAAGTACTACTCAGATCTTGCAGGCCCTGAGAATGCAGCCAAGTACAAAACCTTCATATTTCTAGCAGGATCAGCCTCTGCTGAAGTCATTGCTGATATTGCACTCTGCCCCATGGAGGCTGTGAAAGTTCGTGTGCAAACCCAGCCTGGCTTTGCAAGAGGTTTGTCAGATGGATTACCCAAGTTCATTAAGGCTGAGGGTGCTGGAGGCTTGTACAAAGGACTTGTTCCACTCTGGGGTCGCCAGATTCCATACACAATGATGAAATTTGCTTCATTTGAGACTGTTGTGGAGATGCTGTACAAGAATGTCGTCCCAACCCCGAAGGATCAGTGCAGCAAAGGATTGCAGCTTGGAGTGAGTTTTGCAGCTGGATACATTGCTGGTGTGCTATGTGCTATTGTCTCACACCCTGCTGACAACCTTGTTTCCTTCCTCAACAACGCCAAGGGAGCCACTGTTGGAGATGCTGTGAAGAAGATAGGGTTGGTTGGTCTTTTCACCCGTGGTCTTCCTCTTCGTATAGTTATGATTGGAACACTAACAGGAGCTCAGTGGGGACTCTATGATTCCTTCAAAGTGTTTGTAGGGCTGCCTACCTCTGGTGGAGGTGCATCTAAACCTGCCAAGTAG 1059 0.4759 MAPSDQPRHSLIPSFLYSPKALSSLSSSSSPPPSGSEGSNGNNNFMIPAPKEAIPLYSSAYYMACSFGGIFSCGLTHMSVTPLDLVKCNMQIDPVKYKNISSGFGILMKEQGMRGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDLAGPENAAKYKTFIFLAGSASAEVIADIALCPMEAVKVRVQTQPGFARGLSDGLPKFIKAEGAGGLYKGLVPLWGRQIPYTMMKFASFETVVEMLYKNVVPTPKDQCSKGLQLGVSFAAGYIAGVLCAIVSHPADNLVSFLNNAKGATVGDAVKKIGLVGLFTRGLPLRIVMIGTLTGAQWGLYDSFKVFVGLPTSGGGASKPAK 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272643g00003 352 ProSiteProfiles Solute carrier (Solcar) repeat profile. 157 241 IPR018108 -
Stsc272643g00003 352 ProSiteProfiles Solute carrier (Solcar) repeat profile. 258 337 IPR018108 -
Stsc272643g00003 352 MobiDBLite consensus disorder prediction 21 42 - -
Stsc272643g00003 352 Gene3D Mitochondrial carrier domain 60 338 IPR023395 -
Stsc272643g00003 352 Pfam Mitochondrial carrier protein 62 146 IPR018108 -
Stsc272643g00003 352 Pfam Mitochondrial carrier protein 163 245 IPR018108 -
Stsc272643g00003 352 ProSiteProfiles Solute carrier (Solcar) repeat profile. 60 144 IPR018108 -
Stsc272643g00003 352 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 49 348 IPR044677 GO:0005315|GO:1990547
Stsc272643g00003 352 FunFam Phosphate carrier protein, mitochondrial 60 338 - -
Stsc272643g00003 352 SUPERFAMILY Mitochondrial carrier 62 332 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272643g00003 Stsc-Chr272643 22025 23560 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272643g00003 5 351 Chloroplast and Mitochondria Gene Families AT5G14040 75.137 0.0 549
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272643g00003 K15102 - gmx:100800530 574.704