Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272639g00001 ATGGTGATTGATTCTGATACAAAATTATTATTATTATGTGAACAGAGAGAAGAGGGGGTAGATGTTAGAAAGATGATGGGGCATAAAAGGAGCCCATGTTCTGTTGACCAAAGCAGTTACACTTCTATTGAATCTAAAAGGCAAAAGGCTAATGATTTATCAATCACCACAAAGGAGAGGAAGGAGAAGCTTAGTGAACGAATTGTCGCTTTGCAGCAGCTTGTTTCGCCATATGGCAAGACAGATACATCTTCTGTCTTAGAGGAAGCAATGCAATACATAGGTTTCCTTCATAAACAACTTCTTAGTGCTCCTTACCTCGAAAGTTCGGCAGCAACCAAGAATCCGGGTTTGGAGCCATGCAGCCTGAGGAGTAGAGGGTTGTGTCTTGTTCCGGTCTCACTAACAATTGGAGTTGCTGAGAGCAATGGTGCAGATATCTGGGCTCCCATCAAGACTACTACTTCGCCGCCGAAATTCGAGAAGGATGTCGCACAATTTCCGTCGTAA 510 0.4333 MVIDSDTKLLLLCEQREEGVDVRKMMGHKRSPCSVDQSSYTSIESKRQKANDLSITTKERKEKLSERIVALQQLVSPYGKTDTSSVLEEAMQYIGFLHKQLLSAPYLESSAATKNPGLEPCSLRSRGLCLVPVSLTIGVAESNGADIWAPIKTTTSPPKFEKDVAQFPS 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272639g00001 169 FunFam Transcription factor bHLH113 family 46 120 - -
Stsc272639g00001 169 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 53 102 IPR036638 GO:0046983
Stsc272639g00001 169 CDD bHLH_AtbHLH_like 54 101 IPR045239 -
Stsc272639g00001 169 Gene3D - 42 104 IPR036638 GO:0046983
Stsc272639g00001 169 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 37 136 - -
Stsc272639g00001 169 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 48 97 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272639g00001 Stsc-Chr272639 270 2083 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272639g00001 25 160 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31730 57.246 5.59e-48 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272639g00001 - - ahf:112715472 289.271