Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272635g00003 ATGGAGGATCGGCCTTATATGATGCAGCATCCATCAATGTCACAGAAGCTAGGCGGGGATTCTTTTATTATGTCCAAGTTTGCCACTGGATGTTTCCCGGGAAACTCTTCCACCACTGGTAGTTACTACTTCAATGGCTTGAAGGCTGTGGCCCCGGTGGTGTCTCCGGTCACGGCTTACTCTCCGGCGGAGAAAGGAGGAGCTACAAGTTCTTTCATAGTGGATTTTCTTATGGGAGGAGTGTCTGCTGCCGTGTCTAAGACAGCGGCAGCGCCGATCGAAAGAGTTAAGTTGCTAATTCAGAACCAGGATGAGATGATCAAGAGCGGTAGATTGTCTCATCCGTACAAGGGAATTGGTGATTGTTTTGCTAGAACTATTAAGGACGAAGGGCTGATTTCACTTTGGAGAGGAAACACTGCTAATGTTATCAGATACTTCCCTACTCAGGCTTTGAACTTTGCTTTCAAGGATTATTTCAAGAAGCTCTTCAACTTCAAGAAAGAAAGAGATGGGTACTGGAAATGGTTTGCCGGGAACTTGGCATCGGGTGGGGCTGCCGGAGCTTCATCCCTCTTGTTTGTCTATTCTTTGGACTTTGCCAGAACCCGTTTGGCCAATGATGCTAAGGCTGCTAAGCAGGGTGGTCAAAGGCAGTTCAATGGCTTGGTTGATGTCTACACCAAAACCATTAAATCCGACGGTATCACCGGCCTTTACCGCGGATTCACCATCTCCTGTGTCGGGATTGTTGTGTACCGTGGTCTCTATTTCGGAATGTATGATTCTTTGAAACCGGTGGTTTTGGTCGATGGCTTGCAGGATAGTTTCTTTGCAAGTTTCATTTTGGGTTGGGGGATCACAATAGGTGCTGGCTTGGCCTCTTACCCCATTGATACTGTGCGTAGAAGGATGATGATGACATCCGGAGAAGCCGTGAAGTACAGCGGCTCGTTGGATGCATTCAAGCAGATCATCGCCAAAGAGGGCGCTAAATCGCTCTTCAAAGGCGCCGGGGCGAACATATTGCGTGCTGTTGCAGGTGCCGGAGTGCTTGCCGGTTATGATAAGCTACAGCTTGTCTTGTTTGGAAAGAAATATGGTTCTGGCGGTGGAGGCTAA 1122 0.4831 MEDRPYMMQHPSMSQKLGGDSFIMSKFATGCFPGNSSTTGSYYFNGLKAVAPVVSPVTAYSPAEKGGATSSFIVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGIGDCFARTIKDEGLISLWRGNTANVIRYFPTQALNFAFKDYFKKLFNFKKERDGYWKWFAGNLASGGAAGASSLLFVYSLDFARTRLANDAKAAKQGGQRQFNGLVDVYTKTIKSDGITGLYRGFTISCVGIVVYRGLYFGMYDSLKPVVLVDGLQDSFFASFILGWGITIGAGLASYPIDTVRRRMMMTSGEAVKYSGSLDAFKQIIAKEGAKSLFKGAGANILRAVAGAGVLAGYDKLQLVLFGKKYGSGGGG 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272635g00003 373 FunFam ADP,ATP carrier protein, mitochondrial 73 368 - -
Stsc272635g00003 373 Pfam Mitochondrial carrier protein 276 363 IPR018108 -
Stsc272635g00003 373 Pfam Mitochondrial carrier protein 70 167 IPR018108 -
Stsc272635g00003 373 Pfam Mitochondrial carrier protein 174 268 IPR018108 -
Stsc272635g00003 373 SUPERFAMILY Mitochondrial carrier 70 357 IPR023395 -
Stsc272635g00003 373 PRINTS Mitochondrial carrier protein signature 240 258 IPR002067 GO:0055085
Stsc272635g00003 373 PRINTS Mitochondrial carrier protein signature 88 102 IPR002067 GO:0055085
Stsc272635g00003 373 PRINTS Mitochondrial carrier protein signature 190 208 IPR002067 GO:0055085
Stsc272635g00003 373 PRINTS Mitochondrial carrier protein signature 138 158 IPR002067 GO:0055085
Stsc272635g00003 373 PRINTS Mitochondrial carrier protein signature 75 88 IPR002067 GO:0055085
Stsc272635g00003 373 PRINTS Mitochondrial carrier protein signature 284 306 IPR002067 GO:0055085
Stsc272635g00003 373 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 68 371 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Stsc272635g00003 373 ProSiteProfiles Solute carrier (Solcar) repeat profile. 70 163 IPR018108 -
Stsc272635g00003 373 Gene3D Mitochondrial carrier domain 73 368 IPR023395 -
Stsc272635g00003 373 PRINTS Adenine nucleotide translocator signature 72 84 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Stsc272635g00003 373 PRINTS Adenine nucleotide translocator signature 280 296 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Stsc272635g00003 373 PRINTS Adenine nucleotide translocator signature 149 161 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Stsc272635g00003 373 PRINTS Adenine nucleotide translocator signature 116 137 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Stsc272635g00003 373 PRINTS Adenine nucleotide translocator signature 175 188 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Stsc272635g00003 373 ProSiteProfiles Solute carrier (Solcar) repeat profile. 175 267 IPR018108 -
Stsc272635g00003 373 ProSiteProfiles Solute carrier (Solcar) repeat profile. 275 361 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272635g00003 Stsc-Chr272635 9853 11977 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272635g00003 9 363 Antiporters AT4G28390 76.359 0.0 544
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272635g00003 K05863 - gmx:100802974 569.311