Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272632g00003 ATGGCAGACGAGGTTGTTCTGTTGGATACATGGATCAGCATGTTTGGTATGAGGGTCAGAGTTGCTTTGGCTGAAAAGGGTGTCAACTATGACTACAAGGAACAGGATCTCAAGAACAAGAGCTCTTTGCTTCTTCAGATGAATCCAATTCACAAGAAGATCCCAGTTCTGATCCACAATGATAGACCAGTATGTGAATCTGCAAATATAGTTGAATACATTGATGAGGTTTGGAATGGTAAATCTCCTTTCATGCCTTCTGATCCTTATGAGAGAGCTCAAGCCAGATTCTGGGTTGATTTCATTGACAAAATGATATATGAAACTTGGAAGAAAATGTGGCTTTCAGAAGGGGAAGAACATGAGGCATGGAAAAAGGAGTTAATCTCTATTTTCAAGCAACTTGAGGATGCATTGGGAGACAAAACATTTTTTGGGGGTGACACATTTGGGTTTCTTGACATTGCTCTAATCCCATTTTCTTGCTGGTTTTATACCTTTGAGACTTATGGAAACTTCACAATGGAAGCAGAGTGCCCTAAACTGATGACATGGGTCAAAAGGTGCTCTCAGAGAGAGGCTGTGTCCAACACACTCCCTGATCACAACAAGCTTATGTATGTGGCTGATAATGTTTCGTGTACTATAGTTAGTTTGCTAAGAGGACTAATGTTTGGCATGAGAGCCAGGATTGTATTATCTGAGAAAGGTGTCAGTTATGAGTACAAAGGAACAAGATGTCAAGAACAAGAGTTCTTTGCTTCTACAGATGAATCTAATTCACAAGAAGGTTCCAATTCTGATCCATAA 810 0.4 MADEVVLLDTWISMFGMRVRVALAEKGVNYDYKEQDLKNKSSLLLQMNPIHKKIPVLIHNDRPVCESANIVEYIDEVWNGKSPFMPSDPYERAQARFWVDFIDKMIYETWKKMWLSEGEEHEAWKKELISIFKQLEDALGDKTFFGGDTFGFLDIALIPFSCWFYTFETYGNFTMEAECPKLMTWVKRCSQREAVSNTLPDHNKLMYVADNVSCTIVSLLRGLMFGMRARIVLSEKGVSYEYKGTRCQEQEFFASTDESNSQEGSNSDP 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272632g00003 269 Gene3D - 88 214 - -
Stsc272632g00003 269 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Stsc272632g00003 269 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 210 IPR010987 -
Stsc272632g00003 269 FunFam Glutathione S-transferase U20 88 216 - -
Stsc272632g00003 269 CDD GST_N_Tau 5 78 - -
Stsc272632g00003 269 SFLD Main (cytGST) 2 210 - -
Stsc272632g00003 269 CDD GST_C_Tau 89 206 IPR045074 GO:0004364|GO:0006749
Stsc272632g00003 269 SUPERFAMILY GST C-terminal domain-like 76 206 IPR036282 -
Stsc272632g00003 269 Pfam Glutathione S-transferase, C-terminal domain 121 188 - -
Stsc272632g00003 269 Pfam Glutathione S-transferase, N-terminal domain 7 76 IPR004045 -
Stsc272632g00003 269 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 8 205 IPR045073 -
Stsc272632g00003 269 SUPERFAMILY Thioredoxin-like 5 106 IPR036249 -
Stsc272632g00003 269 Gene3D Glutaredoxin 1 87 - -
Stsc272632g00003 269 FunFam Tau class glutathione S-transferase 1 87 - -
Stsc272632g00003 269 SFLD Main.3: Omega- and Tau-like 2 210 IPR045073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272632g00003 Stsc-Chr272632 5154 7264 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272632g00003 1 206 Glutathione S-transferase Gene Family AT1G17180 63.592 1.82e-100 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272632g00003 K00799 - gmx:547950 338.961