Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272632g00002 ATGAATCTTGCTCCTACAATGGTGGACAATAGCAGCCATAATAATGTTGTTTTGTTGGGCTCAGGGTTCAGCATGTTTGGCATGAGAGCAAGAATTGCATTGGCAGAGAAAGGAATCAAGTATGAGTACAAGGAAGAAGATCTCAGCAATAAGAGCTCCTTGCTCTTAGAAATGAATCCAGTTCAAAAGAAGATCCCAGTTCTCATACACAATGGGAAGCCAATTTGTGAGTCCCTCATAATTCTTGAGTATATTGATATGGTTTGGAACAACAACAATAATGGTGCAGCTCCAATAATGTTACTTCCTTCTGATCCCTATGACAAATCTCAAGCCAGATTCTGGGCTGATTTTGTAGATCACAAGGTGTATCATGATTCTAGGAGGATATGGACTTCCAAAGGAGATGAGCAAGACTTGGCTAAGAAGGGTTTCATTGAGAGCATGAAACAATTGGAGGAATTTCTGGGAGACAAGCCTTATTTTGGAGGGGAGAATTTTGGGTTTGTTGATGTTGCTCTCATCCCTTTCTATTGTTGGTTTTATACATATGAGATGTTTGGCAACTTCAAACTTGTCACATTTTGTCCTAAAATCATCTCATGGGCTAATAGATGCATGGAAAGAGAAAGTGTGTCTGTGACTCTTGCAGATGGGAAGGAGGTTTATGAGTCTGTTTTGGATTACAAGAACAAATTTTTGATGGACTAA 711 0.3938 MNLAPTMVDNSSHNNVVLLGSGFSMFGMRARIALAEKGIKYEYKEEDLSNKSSLLLEMNPVQKKIPVLIHNGKPICESLIILEYIDMVWNNNNNGAAPIMLLPSDPYDKSQARFWADFVDHKVYHDSRRIWTSKGDEQDLAKKGFIESMKQLEEFLGDKPYFGGENFGFVDVALIPFYCWFYTYEMFGNFKLVTFCPKIISWANRCMERESVSVTLADGKEVYESVLDYKNKFLMD 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272632g00002 236 CDD GST_C_Tau 106 229 IPR045074 GO:0004364|GO:0006749
Stsc272632g00002 236 CDD GST_N_Tau 16 89 - -
Stsc272632g00002 236 FunFam Glutathione S-transferase U20 105 236 - -
Stsc272632g00002 236 Gene3D - 105 236 - -
Stsc272632g00002 236 SUPERFAMILY Thioredoxin-like 15 124 IPR036249 -
Stsc272632g00002 236 FunFam Tau class glutathione S-transferase 10 97 - -
Stsc272632g00002 236 SFLD Glutathione Transferase (cytosolic) 13 234 IPR040079 -
Stsc272632g00002 236 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 14 93 IPR004045 -
Stsc272632g00002 236 Gene3D Glutaredoxin 12 100 - -
Stsc272632g00002 236 SFLD Main.3: Omega- and Tau-like 13 234 IPR045073 -
Stsc272632g00002 236 Pfam Glutathione S-transferase, C-terminal domain 141 202 - -
Stsc272632g00002 236 SUPERFAMILY GST C-terminal domain-like 101 232 IPR036282 -
Stsc272632g00002 236 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 20 220 IPR045073 -
Stsc272632g00002 236 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 105 229 IPR010987 -
Stsc272632g00002 236 Pfam Glutathione S-transferase, N-terminal domain 22 86 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272632g00002 Stsc-Chr272632 3471 4385 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272632g00002 14 234 Glutathione S-transferase Gene Family AT1G78380 57.014 5.49e-92 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272632g00002 K00799 - gmx:548030 349.747