Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272632g00001 ATGGCAGAAAACGATGAAGTAATATTGCTAGATTTCTGGCTAAGCCCATTCGCGAGGAGGGTGCAAATAGCACTAGAGGAAAAGGGGGTCAAGTATGAGATTAAAGAAGAGGACTTGCCTATTAATAAGAGCGATTTACTCCTACAAATGAATCCTGTTCATAAGAAAGTTCCAGTTCTTATTCACAATGGAAAACCCATTTGTGAGTCACTTGTTTGTCTTGAGTACATTGAGGAGGTTTGGAAGCATAAATCTCCTTCATTGCTGTCTTCTGATCCTTACCAAAGAGCACAAGCTAGATTTTGGGCTGATTATGTCGACAAGAAGGTATACAGCAGTGGCCTAAAGTATATGAAAACAGAAGGAGAAGAGAAAGAAGTTGCAAAGAAAGAGTTTATTGAGGGACTCAAAATAATGGAAGAACAAATTGGAGACAATAAATATTTTGGTGGAGACAACATCGGAATTGTGGATGTGACACTTGTTCCATTGTCCAGTTGGTTCTACACCTACAAGTTCACTGCCAACTACAGTTTTGTGAATCAAGAAAGCTTCCCTAACATATTTGCTTGGGCCAAGAGGTGCAATGAGAGAGAGAGTGTGTCCAAGTGTTTACCTGAGGAACAAAAGGTCATTGAGCTTTTGAAGCAGAGGGATCTCTTGAATTCTGATAAGTGA 678 0.3982 MAENDEVILLDFWLSPFARRVQIALEEKGVKYEIKEEDLPINKSDLLLQMNPVHKKVPVLIHNGKPICESLVCLEYIEEVWKHKSPSLLSSDPYQRAQARFWADYVDKKVYSSGLKYMKTEGEEKEVAKKEFIEGLKIMEEQIGDNKYFGGDNIGIVDVTLVPLSSWFYTYKFTANYSFVNQESFPNIFAWAKRCNERESVSKCLPEEQKVIELLKQRDLLNSDK 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272632g00001 225 CDD GST_C_Tau 93 218 IPR045074 GO:0004364|GO:0006749
Stsc272632g00001 225 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 92 214 IPR010987 -
Stsc272632g00001 225 CDD GST_N_Tau 7 81 - -
Stsc272632g00001 225 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 10 212 IPR045073 -
Stsc272632g00001 225 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 5 85 IPR004045 -
Stsc272632g00001 225 SUPERFAMILY Thioredoxin-like 7 110 IPR036249 -
Stsc272632g00001 225 Pfam Glutathione S-transferase, C-terminal domain 119 199 IPR004046 -
Stsc272632g00001 225 SFLD Glutathione Transferase (cytosolic) 3 218 IPR040079 -
Stsc272632g00001 225 SFLD Main.3: Omega- and Tau-like 3 218 IPR045073 -
Stsc272632g00001 225 FunFam Tau class glutathione S-transferase 1 90 - -
Stsc272632g00001 225 Gene3D - 92 220 - -
Stsc272632g00001 225 Pfam Glutathione S-transferase, N-terminal domain 7 78 IPR004045 -
Stsc272632g00001 225 Gene3D Glutaredoxin 3 91 - -
Stsc272632g00001 225 SUPERFAMILY GST C-terminal domain-like 79 218 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272632g00001 Stsc-Chr272632 1851 3383 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272632g00001 5 217 Glutathione S-transferase Gene Family AT1G78380 55.399 7.45e-83 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272632g00001 K00799 - gmx:100776076 291.197