Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272607g00002 ATGATGGATTCAGAACCAGCTTTCTTACATGGCGACTTGGATCTCTGGATTCTGGAGGCAAAAAATCTCCCAAATTTGGATCTTTCCTCAGAGACTATGCGGAAATGCATCACCATGGGGAACCGGTGTTCCCCTCCCTTTGTGAAAGGGATCAAGACACACTCAGGGAAACACAAAATGATTACCAGCGACCCCTATGTCTCTATGTGCCTTGCAGGGGCTACCATTGCTCAAACTAGGATCATTCCTAACTGTGAAAACCCTTTGTGGGATGAGCATTTCTTAATCCCGGTTGCTCACCCTGCTCAGAAATTGGAGTTCCATGTCAAAGACAATGATGTTCTTGGTGCTGAGCTCATTGGAGTAGTGGAGATATCTGCTAAGAGAATTTTGTCCGGAGGAATCGTCAACGATTGGTTTCCGGTCATTGGCCAGAGTGGAAACTGCTTGAGACCCCATCCTGAGCTGCATCTGTCTATCCAATTTAGGCCAGTTGGAGCAGAAACAGATTCTCTGGAAGTTCCTAATACCTATTTTCCTCTCAGAAAAGGAGGGTCTGTGACCCTTTATCAAGATGCACATGTGCCGGATGGTAAGCTGCCTGAGATTCCACTTGAGGATGGGAAGGTCTTTCAGCAGGGTAAGTGTTGGGAAGAAATTTGCGATGCCATTTTGGAAGCTCACAACCTTGTGTATATTATAGGGTGGTCGGTTTACCACCCGGTAAAGCTTGTCAGGGAGCCGTCGAAGCCCCTGCCTTCTCATGGAAAGCTTTCATTTGGAGAGTTACTGAAATACAAGTCGCAAGAAGGGGTCCGTGTGGTGGTGCTCATTTGGGATGACAAAACCTCGCATGACAAATTATTTTTGAAAACAGATGGTGTCATGCAAACTCACGATGAACAAACTAGAAAGTATTTTAAGAACACTACCGTGCATTGTGTGCTAGCTCCACGTTATGCAAGCAGTAAGCTCAGTGTTTTCAAGCAACAGGCATGGAATTCCTGCACCTGA 1014 0.4606 MMDSEPAFLHGDLDLWILEAKNLPNLDLSSETMRKCITMGNRCSPPFVKGIKTHSGKHKMITSDPYVSMCLAGATIAQTRIIPNCENPLWDEHFLIPVAHPAQKLEFHVKDNDVLGAELIGVVEISAKRILSGGIVNDWFPVIGQSGNCLRPHPELHLSIQFRPVGAETDSLEVPNTYFPLRKGGSVTLYQDAHVPDGKLPEIPLEDGKVFQQGKCWEEICDAILEAHNLVYIIGWSVYHPVKLVREPSKPLPSHGKLSFGELLKYKSQEGVRVVVLIWDDKTSHDKLFLKTDGVMQTHDEQTRKYFKNTTVHCVLAPRYASSKLSVFKQQAWNSCT 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272607g00002 337 PANTHER PHOSPHOLIPASE D 8 331 IPR015679 -
Stsc272607g00002 337 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 8 165 IPR035892 -
Stsc272607g00002 337 Pfam C2 domain 11 142 IPR000008 -
Stsc272607g00002 337 ProSiteProfiles C2 domain profile. 1 140 IPR000008 -
Stsc272607g00002 337 Gene3D C2 domain 9 176 IPR035892 -
Stsc272607g00002 337 SUPERFAMILY Phospholipase D/nuclease 177 321 - -
Stsc272607g00002 337 CDD C2_plant_PLD 9 163 - -
Stsc272607g00002 337 SMART C2_3c 12 139 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272607g00002 Stsc-Chr272607 9800 11156 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272607g00002 8 331 Phospholipase D Gene Family (Wang group) AT4G35790 50.287 5.52e-118 354
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272607g00002 K01115 - gmx:100779740 548.895