Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272593g00007 ATGTGGCTCCCAAGTACAAAGGCATCATCGGTAATTAGAAAGGGTGGAGGGGGAAATGGATTGGTGGCAGTTGCAATAGATAAGGATAGCAAAGGTAGTCGCTATGCTCTCAAATGGGCTGCCGATAGCCTTCTTGTCAGAGGCCAAACTGTTGTTCTTATCCACGTTTTGCACAAGAATTCTTCCCCTCTTTCTATTGGAGGTAGCCATGCCATAATATGCAACAGTCATAGTCCATCTATATCTCCTCAAAGAGAGCATCTCATCAACATTACTAAGGATCTGTTTCGTACCTTTCACTGCTATTGCACACGTAAAGATATACAATGCCTTGATGTGCTAGTTGAAGACACTGACGTTGTGAAAGGAATAACAGAATATGTGTCTTACGCGGCAATTGAGAACCTAGTGCTTGGTGCAGCGTCAAGGCATGGTTTCATAAGATTCAAGTCATCAAATACACCAAGCAACATATCAAAAGGGGCGCCTGATTTCTGTACAGTGTATATAATATCAAAAGGGAAGATATCTTCAGTTAGGAGTGCTTCCCGTTCGGCAGCACATGCTTCTCCTCTGCTCGGGCATATACAGGCCCTAAATAATGACAACGACAGCGCAAGTGAAACAAGTAGTCAGTTATCGTCAAGGCGTATGAGCTTCAAAGATCATAGAAGATCATCCATGAAACCTCACAGCTGGCAGGATGAATCCTTAAGGTCATCATCATCATCATCATCACAAATTGGAAAAACAATGGGGCCGGTGGGGTTGGGGTTCATGGAGTTAGCCCCAGACTCCGATACAGACATATCATTTGTGAGCTCCGGGAGGCCAAGTACCAGTGGGCGTTCCTCCTCTGTCTTGTATGACTGCATCGACTCTTGCTCTGCTCGTAATTCACGAGTCTCAACCAGTTCCGATCGTAGCTTGGGATCAATCCGCTGTAGCCTCGCTTTCCCAACTTCCCCCGACCCGAATATTTCTCTTTCTTTCTCTCAGGAAAGCATTGGAACCTCCTCCTTTTCTTATTCCTCTCAGAACATGGATGATGTAGAATCTGACATGAAGAGGCTCAAGCTTGAATTAAAACAAACCATGGAAATGTACAGTACAGCGTGCCGAGAGGCACTCACTGCACAACACAAGCTAATGGAACTTAACTCGTGGAGAATTGAAGAGGAAAAGAAATTAGACGAGGCACGATTGGCCCAAGAAGTAGCATTGGCAATCGCAGAGAAAGAGAAAGCAAGGAGCAAAGCAGCCCTGGAAACTGCAGAGGCAGCCAAAAGAATCGCCGAGGCTGAAGCAAACAGAAGAGTAAATGCTGAAATGAAAGCTCTTAAAGAAGCAGAGGAAATGAGGAAACTATTGGATAATCTAGCTCAAACCGATGAAAGATATAGGAAATACACAATCCAAGAGATTGAAGCTGCTACAGAGTCCTTTTCTGAATCTCGAAAAATCGGGGAGGGTGGTTATGGCCCTGTCTATAAATGTTACCTTGACCACACTCCTGTGGCTGTCAAGGTTCTACGACAAGATTCTGCTCAGGGGAAATCGCAGTTTCAGCAAGAGATTGACATATTGAGCTGCATACGGCATCCGAATATGGTTCTTCTTGTTGGAGCATGTCCAGAGCACGGCATACTTATCTATGAATACATGGCCAATGGGAGCTTAGAAGATTGCATGTTTCAGAAGAAGGGGATTGTTCTGTCTTGGAAGCTCAGATTTCGGATTGCGGCAGATGTAGCCACTGGCTTACTATTCCTCCACCAGACCAAGCCAGAACCACTGGTACACCGTGATCTAAAGCCAGCCAACATTTTATTAGACCACAACTTTGTAAGCAAGATCAGCGACGTTGGCTTGGCGAGGCTTCTCCCCGCCGTGGCCGAAAATGTGACGCAGTGTTGCATGACGTCAGCAGCGGGAACATTTTGCTACATTGATCCCGAGTATCAGCAGACTGGAATGCTTGGAGTGAAGTCGGACGTGTACTCTTTAGGGATCATTCTTCTTCAGTTATTGACAGGAAGGGCTCCAATGGGGCTGGCTCACCAAGTTGAGCGCTCCATTGAGAAGGAGGCACTGGGTGAGATCCTTGACCCCTCTGTCACAGACTGGCCTCTTGAAGAAGCCTTATGCCTTGCCAAACTCGGACTCACTTGTGCAGAGCTCAGACGAAAAGATAGGCCAGACCTTGCTCAACATGTACTGCCACAACTCAAAAAGCTTAGAGACTTTGCTGAAGGCAATTCCAGCCCAACTTTCTCTTGTAGTAACCTTAGTTATGCAACATCTCCCTATGTCAGTCAAGCTTCTACACAGCAGGATGTAATGAGCGAACCACCCTTTGAACATTCGCCAACTTCAACAAGTCCCTCAACTCCTTCATCCCCAACACAAGAAAATCAAGGGGCCAAGTCCGAGTAA 2436 0.4614 MWLPSTKASSVIRKGGGGNGLVAVAIDKDSKGSRYALKWAADSLLVRGQTVVLIHVLHKNSSPLSIGGSHAIICNSHSPSISPQREHLINITKDLFRTFHCYCTRKDIQCLDVLVEDTDVVKGITEYVSYAAIENLVLGAASRHGFIRFKSSNTPSNISKGAPDFCTVYIISKGKISSVRSASRSAAHASPLLGHIQALNNDNDSASETSSQLSSRRMSFKDHRRSSMKPHSWQDESLRSSSSSSSQIGKTMGPVGLGFMELAPDSDTDISFVSSGRPSTSGRSSSVLYDCIDSCSARNSRVSTSSDRSLGSIRCSLAFPTSPDPNISLSFSQESIGTSSFSYSSQNMDDVESDMKRLKLELKQTMEMYSTACREALTAQHKLMELNSWRIEEEKKLDEARLAQEVALAIAEKEKARSKAALETAEAAKRIAEAEANRRVNAEMKALKEAEEMRKLLDNLAQTDERYRKYTIQEIEAATESFSESRKIGEGGYGPVYKCYLDHTPVAVKVLRQDSAQGKSQFQQEIDILSCIRHPNMVLLVGACPEHGILIYEYMANGSLEDCMFQKKGIVLSWKLRFRIAADVATGLLFLHQTKPEPLVHRDLKPANILLDHNFVSKISDVGLARLLPAVAENVTQCCMTSAAGTFCYIDPEYQQTGMLGVKSDVYSLGIILLQLLTGRAPMGLAHQVERSIEKEALGEILDPSVTDWPLEEALCLAKLGLTCAELRRKDRPDLAQHVLPQLKKLRDFAEGNSSPTFSCSNLSYATSPYVSQASTQQDVMSEPPFEHSPTSTSPSTPSSPTQENQGAKSE 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272593g00007 811 MobiDBLite consensus disorder prediction 233 251 - -
Stsc272593g00007 811 MobiDBLite consensus disorder prediction 199 216 - -
Stsc272593g00007 811 Gene3D Phosphorylase Kinase; domain 1 427 554 - -
Stsc272593g00007 811 Gene3D Transferase(Phosphotransferase) domain 1 555 759 - -
Stsc272593g00007 811 SUPERFAMILY Protein kinase-like (PK-like) 466 737 IPR011009 -
Stsc272593g00007 811 CDD STK_N 21 174 - -
Stsc272593g00007 811 Pfam Protein kinase domain 483 715 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc272593g00007 811 Coils Coil 348 368 - -
Stsc272593g00007 811 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 454 554 - -
Stsc272593g00007 811 ProSitePatterns Serine/Threonine protein kinases active-site signature. 599 611 IPR008271 GO:0004672|GO:0006468
Stsc272593g00007 811 MobiDBLite consensus disorder prediction 199 260 - -
Stsc272593g00007 811 PANTHER OS02G0152300 PROTEIN 22 797 - -
Stsc272593g00007 811 MobiDBLite consensus disorder prediction 771 811 - -
Stsc272593g00007 811 Coils Coil 408 473 - -
Stsc272593g00007 811 ProSiteProfiles Protein kinase domain profile. 482 743 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc272593g00007 811 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 23 171 - -
Stsc272593g00007 811 SMART serkin_6 482 741 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc272593g00007 811 Gene3D HUPs 15 171 IPR014729 -
Stsc272593g00007 811 MobiDBLite consensus disorder prediction 217 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272593g00007 Stsc-Chr272593 15111 18354 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272593g00007 1 783 Receptor kinase-like Gene Family AT1G78940 54.705 0.0 787
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Stsc272593g00007 Pkinase 6.2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272593g00007 - - ahf:112740428 1335.86