Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272593g00005 ATGTGGGTGTCTGTTCGTGCCAATGTTAGAGTCTCTAGTGCTGCAAGACGGTCTGCAAGAGAGGCATTGCAGGTAGCTACTCGTGCCGGTGGTTTATCTGCTATCATCGTTGTTGGTATGGCTGTCATTGGGATAGCGGTCCTTTATGCCACATTTTATGTTTGGCTTGGCGTGGACTCACCAGGGTCAATGAAAGTTACTGATCTGCCTCTTCTTCTTGTTGGCTATGGATTTGGTGCTTCCTTTGTTGCACTGTTTGCTCAGTTGGGTGGTGGAATATATACAAAAGCAGCTGATGTTGGAGCAGACCTTGTTGGAAAAGTAGAACAGGGAATACCCGAAGATGACCCTAGGAATCCTGCTGTTATTGCCGATCTGGTTGGAGATAATGTAGGAGACTGTGCTGCTAGGGGTGCTGATCTTTTTGAAAGTATTGCAGCTGAAATAATCAGTGCTATGATACTTGGAGGAACAATGGCTCACCGTTGTAAAATTGAAGATCCTTCTGGCTTCATCTTGTTTCCTCTTGTTATTCACTCATTTGATCTGGTAGTTTCATCGGTTGGAATATTTTCAATTAGGGGTACACGTGAATCTGGAGTGATGGCTCCAATAGAGGATCCAATGACAATTCTTCAGAAGGGATACTCTGTTACAATAGTTTTAGCTGTTGTGGCATTTGGTCTGTCTACGCGATGGTTACTTTATACCGAGCAAGCACCTTCAGCATGGTTCAATTTTGCTTTGTGTGGGCTCGTTGGTATTATTACTGCTTATGTTTTTGTCTGGATCACCAAGTATTATACTGACTACAAGCATGAACCTGTGCGCACATTAGCCCTTTCTAGCTCCACTGGTCATGGGACTAATATAATTGCTGGAGTCAGTTTGGGTCTTGAGTCAACTGCTCTTCCGGTCCTTGTCATTAGTGTAGCAATTGTCTCAGCTTACTGGCTGGGCCAAACATGTGGACTAGTAGACGAGACAGGAAACCCTATTGGTGGGCTATTTGGCACAGCTGTAGCAACTATGGGAATGCTTAGCACTGCAGCTTATATTCTGACTATGGATATGTTTGGCCCAATAGCTGATAATGCTGGAGGCATTGTAGAGATGAGTCAGCAGCCCGAAAGTGTGCGAGAGATCACTGATGTCCTCGACGCTGTAGGAAACACAACAAAAGCCACCACCAAAGGGTTTGCTATTGGTTCTGCTGCTCTTGCATCTTTCCTTTTGTTTAGTGCTTATATGGATGAGGTTGCCGCATTTGCTCATGAACCTTTTAAACAGGTTGATATTGCAGTTCCGGAAGTTTTCATTGGTGGTTTGTTAGGTTCCATGCTTATATTTGTCTTTAGTGCTTGGGCCTGTTCTGCTGTTGGCCGAACTGCACAAGAGGTTGTTAATGAAGTGAGAAGGCAGTTCATTGAGAGGCCTGGTATAATGGATTACAAGGAGAAACCGGACTATGGTCGCTGTGTTGCCATCGTGGCTTCAGCATCATTAAGAGAGATGATAAAACCTGGTGCTTTGGCAATCATTTCACCTATTGTAGTTGGTTTCCTGTTTCGAATTTTGGGTTACTATACAGGGCATCCCTTACTTGGGGCTAAAGTTGTGGCATCTTTGCTGATGTTTGCAACAGTAGCTGGCATTCTTATGGCACTTTTCCTGAACACAGCCGGTGGTGCATGGGATAATGCAAAGAAGTATATAGAGACTGGCGCTCTTGGAGGCAAGGGAAGTGATGCTCACAAAGCAGCTGTAACAGGAGACACAGTTGGAGACCCCTTCAAGGACACAGCTGGTCCCTCGCTTCATGTGCTCATAAAGATGCTGGCAACGATTACGCTTGTAATGGCTCCAGTGTTCCTGTGA 1878 0.451 MWVSVRANVRVSSAARRSAREALQVATRAGGLSAIIVVGMAVIGIAVLYATFYVWLGVDSPGSMKVTDLPLLLVGYGFGASFVALFAQLGGGIYTKAADVGADLVGKVEQGIPEDDPRNPAVIADLVGDNVGDCAARGADLFESIAAEIISAMILGGTMAHRCKIEDPSGFILFPLVIHSFDLVVSSVGIFSIRGTRESGVMAPIEDPMTILQKGYSVTIVLAVVAFGLSTRWLLYTEQAPSAWFNFALCGLVGIITAYVFVWITKYYTDYKHEPVRTLALSSSTGHGTNIIAGVSLGLESTALPVLVISVAIVSAYWLGQTCGLVDETGNPIGGLFGTAVATMGMLSTAAYILTMDMFGPIADNAGGIVEMSQQPESVREITDVLDAVGNTTKATTKGFAIGSAALASFLLFSAYMDEVAAFAHEPFKQVDIAVPEVFIGGLLGSMLIFVFSAWACSAVGRTAQEVVNEVRRQFIERPGIMDYKEKPDYGRCVAIVASASLREMIKPGALAIISPIVVGFLFRILGYYTGHPLLGAKVVASLLMFATVAGILMALFLNTAGGAWDNAKKYIETGALGGKGSDAHKAAVTGDTVGDPFKDTAGPSLHVLIKMLATITLVMAPVFL 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272593g00005 625 PIRSF H+-PPtase 1 625 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Stsc272593g00005 625 Pfam Inorganic H+ pyrophosphatase 1 620 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Stsc272593g00005 625 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 1 624 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Stsc272593g00005 625 Hamap Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 1 625 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Stsc272593g00005 625 NCBIfam V-type H(+)-translocating pyrophosphatase 1 624 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272593g00005 Stsc-Chr272593 5551 10215 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272593g00005 1 625 Primary Pumps ATPases AT1G16780 89.600 0.0 1158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272593g00005 K23025 - vvi:100247980 1133.63