Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272585g00002 ATGGCCTTAGCCATTTCCTCCACTGCACTTTCAAGCCTTCCAAACAGAGAGATACGGCAAAAGATTGTTCATCATGAAAGGACAAGGACGTTGTTGGCAAGAACAACTCCAATAACAAATGCAACAAAAGGAGTGTCAAGTGTGTGTGAACCACTTCCTCCAGATAGACCATTGTGGTTCCCTGGTAGTTCCCCTCCTCAGTGGCTTGATGGCAGTCTTCCTGGTGATTTTGGGTTTGACCCTCTTGGATTAGGTTCGGATCCAGAGTTGCTGAAATGGTTTGCACAGGCAGAACTGATGCATGCAAGATGGGCAATGCTTGGTGTCTCAGGGATCCTCATTCCAGAGCTTCTTCAGAAAATGGGCTTCCTTCAGAATTTCTCTTGGTACGACGCCCCTACTAGGGAATATTTTGCGGACCCCACAACCCTCTTCGTTGTCCAAATGGCTTTGATGGGCTGGGTTGAGGGTAGGAGATGGGCCGACATGCTCAACCCGGGCTCTGTTGACATTGACCTCAAGCTTCCACACATAACAAAGCCCAAGCCTGATGTTGGGTACCCCGGTGGGTTTTGGTTTGACCCAATGATGTGGGGGAGAGGCTCCCCTGAGCCCGTTATGGTGCTTAGGACTAAGGAGATTAAGAATGGCAGGCTTGCCATGCTGGCATTTGTTGGGTTTTGGTTTCAGGCTATTTATACAGGGGAAGGCCCGATTGATAACTTGATGGCCCATATCGCTGATCCTGGTCACTGCAACATTTTCTCGGCTTTTACATCGCGGTAG 786 0.4936 MALAISSTALSSLPNREIRQKIVHHERTRTLLARTTPITNATKGVSSVCEPLPPDRPLWFPGSSPPQWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLGVSGILIPELLQKMGFLQNFSWYDAPTREYFADPTTLFVVQMALMGWVEGRRWADMLNPGSVDIDLKLPHITKPKPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGFWFQAIYTGEGPIDNLMAHIADPGHCNIFSAFTSR 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272585g00002 261 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 4 259 IPR001344 GO:0009765|GO:0016020
Stsc272585g00002 261 Pfam Chlorophyll A-B binding protein 65 231 IPR022796 -
Stsc272585g00002 261 Gene3D Chlorophyll a/b binding protein domain 66 251 - -
Stsc272585g00002 261 SUPERFAMILY Chlorophyll a-b binding protein 55 260 - -
Stsc272585g00002 261 FunFam Chlorophyll a-b binding protein, chloroplastic 66 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272585g00002 Stsc-Chr272585 21412 24224 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272585g00002 54 261 Chloroplast and Mitochondria Gene Families AT3G61470 67.308 2.39e-103 299
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272585g00002 K08908 - gmx:100812066 466.463