Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272581g00005 ATGTCTACACATGTGATGGCCAAGTGCTGGGGAAAACCTAATGTCTTTAAACATGACAGATATCCCATGTTTGGGACCGGTTTGGTTATGGCGGAGGGCCATCATTGGGTTCGCCACCGCCATCTCATCATGCCTGCCTTTTCACCACTCAACTTGAAGAGAGTTGCAAGCAGGATGGTAGAGTGTGCAAATGAAATGATAATGAGGTGGTCTACTCAAATTAATGACGCTGGTGGCAATGGCATAATAATCGACGTTGAAAAAGACATTATAGGCACGAGCGGAGAGATCATAGCTAAGACATGCTTTGGAGGCACGCAAGATGAAGATGCTAAGCAAGTTCTCCGAAAATTACGAGCCCTGCAAACAACACTTTTTAAGACCACCCGCTATGTTGGGGTTCCCTTTGGAAAGTTCTTCAACGTGAAGAAAACCATAGAGGCCAACAAACTTGGAACAGAAATCGACAGGCTCTTGTTTTCTGTGATACGGGCTCGGAAAGAATCAAAGAAAGCAGATGATGGAATAGATTTATTAGGGTTGTTGATGAATGGAGGAGGAGGTGGTAATAATAATGAGGAGGATGTATTAACAGAAAGAGAGGTTGTGGATGAGTGCAAGACCTTCTTCTTCGGAGGCCATGAGACAACAGCATTGGCCATAACTTGGACTTTGATGCTTCTGGCTTTGCATCCACATTGGCAAATCCAATTGAGACGTGAGATTTTTCAAGTTCTTCCTCGTGATAATCCATTTCATGATATCAATCTTTTTTCGAGCCTCAAAAAGATGAAATGGGTAATGAATGAAGCCCTAAGATTATACCCACCAGCACCGAATGTGCAAAGGCAAGCAAGGCAAGATATTGAAATTGAGGGATTAATGGTGCCTAAAGGAACCAACATGTGGATCGACGTGGTGGGAATGCACCATGACAAAGAGCTGTGGGGAGAGGATGCGAATGAGTTCAAGCCAGAGAGATTCATGGAAGATGTGAATGGTGGATGCAAACACAAGATGGGTTACTTGCCATTTGGATTTGGAGGGAGAATGTGTGTTGGTAGGAACTTGACATTCATGGAGTACAAGATTGTGTTAACACTTGTTCTCTCTAAATTCTCTTTCACCATTTCTCCTTCTTACCGTCACTCACCCTCTATCATGCTCTCTCTAAGGCCCACTCATGGACTCCCACTCATAGTTCAACCACTTTAA 1215 0.437 MSTHVMAKCWGKPNVFKHDRYPMFGTGLVMAEGHHWVRHRHLIMPAFSPLNLKRVASRMVECANEMIMRWSTQINDAGGNGIIIDVEKDIIGTSGEIIAKTCFGGTQDEDAKQVLRKLRALQTTLFKTTRYVGVPFGKFFNVKKTIEANKLGTEIDRLLFSVIRARKESKKADDGIDLLGLLMNGGGGGNNNEEDVLTEREVVDECKTFFFGGHETTALAITWTLMLLALHPHWQIQLRREIFQVLPRDNPFHDINLFSSLKKMKWVMNEALRLYPPAPNVQRQARQDIEIEGLMVPKGTNMWIDVVGMHHDKELWGEDANEFKPERFMEDVNGGCKHKMGYLPFGFGGRMCVGRNLTFMEYKIVLTLVLSKFSFTISPSYRHSPSIMLSLRPTHGLPLIVQPL 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272581g00005 404 PRINTS E-class P450 group I signature 221 247 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272581g00005 404 PRINTS E-class P450 group I signature 342 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272581g00005 404 PRINTS E-class P450 group I signature 201 218 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272581g00005 404 PRINTS E-class P450 group I signature 352 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272581g00005 404 PRINTS E-class P450 group I signature 306 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272581g00005 404 PANTHER CYTOCHROME P450 FAMILY MEMBER 12 396 - -
Stsc272581g00005 404 SUPERFAMILY Cytochrome P450 11 403 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272581g00005 404 PRINTS P450 superfamily signature 343 352 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272581g00005 404 PRINTS P450 superfamily signature 266 277 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272581g00005 404 PRINTS P450 superfamily signature 352 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272581g00005 404 PRINTS P450 superfamily signature 212 229 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272581g00005 404 Gene3D Cytochrome P450 2 404 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272581g00005 404 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 345 354 IPR017972 GO:0005506|GO:0016705
Stsc272581g00005 404 Pfam Cytochrome P450 12 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272581g00005 Stsc-Chr272581 16548 19154 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272581g00005 1 404 Cytochrome P450 AT5G52400 60.837 1.70e-176 500
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272581g00005 - - gmx:100785284 546.584