Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272577g00005 ATGTTGGATGGTGGTGCTAAATTCCCTGGAATCATAGACCTCAACAAGCATAATAACAACTATTATGATCTCTCTCAAGGCTTTTACCACAAGCTTGGGGAGGGTACCAATATGTCAATAGACAGTATAGGGAGCTTGCAAACAAGCAATGGTGGAGGATCTGTTGCGATGTCCGTTGACAACAGCAGTGTTGGATCCAATGATTCCCATACTCGCATGTTGGATCACCAAGGTTTAAAGAGACGTGCAAATGATAACTACTCTGTTGCACACAGTGTCAATCGTCGAGGAAGAGTAACACATGCTTTGAGTGATGATGCCTTGGCTCAGGCTCTAATGGACAGCAGTTCTCCGACTGAGGGGCTTGATAATTTTGATGAGTGGACAATTGATTTGAGGAAGCTTAGCATGGGCGAGCCTTTTGCGCAAGGAGCTTTTGGGAAACTCTACAGAGGCACATACAATAGTGAAGATGTTGCTATCAAAATCTTGGAGAGGCCTGAAAATGATCCAGCAAAGGCTCAGTTGATGGAACAACAATTTCAGCAGGAGGTCATGATGTTGGCCACACTAAAGCACCCTAACATAGTTCGGTTCATTGGTGCCTGCCGTAAGCCGATGCTTCAGACGTTGCAAGGGGGATGGCATATGTTCATGGCCTGGGATTGA 669 0.4559 MLDGGAKFPGIIDLNKHNNNYYDLSQGFYHKLGEGTNMSIDSIGSLQTSNGGGSVAMSVDNSSVGSNDSHTRMLDHQGLKRRANDNYSVAHSVNRRGRVTHALSDDALAQALMDSSSPTEGLDNFDEWTIDLRKLSMGEPFAQGAFGKLYRGTYNSEDVAIKILERPENDPAKAQLMEQQFQQEVMMLATLKHPNIVRFIGACRKPMLQTLQGGWHMFMAWD 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272577g00005 222 FunFam Serine/threonine-protein kinase isoform 1 125 211 - -
Stsc272577g00005 222 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 61 206 - -
Stsc272577g00005 222 Pfam Protein tyrosine and serine/threonine kinase 136 205 IPR001245 GO:0004672|GO:0006468
Stsc272577g00005 222 SUPERFAMILY Protein kinase-like (PK-like) 122 206 IPR011009 -
Stsc272577g00005 222 ProSiteProfiles Protein kinase domain profile. 135 222 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc272577g00005 222 Gene3D Phosphorylase Kinase; domain 1 126 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272577g00005 Stsc-Chr272577 19618 20389 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272577g00005 17 211 MAP Kinase Kinase Kinase AT4G31170 68.528 4.25e-87 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Stsc272577g00005 PK_Tyr_Ser-Thr 3.1e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272577g00005 - - gmx:100788536 402.134