Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272560g00004 ATGGGTGTCGAAAATAATAATAATGGAGAATTCAAAGTGAAGGTAACAAAAGAAGATGTGGTAGTAGCAGCCATGCTTCCCATGCAAGACCATTGGCTACCACTCTCAAACCTTGATCTCCTTCTTCCACCCCTTGATTTTGGTGTCTTCTTTTGCTACCATAACACTACAATGAGCTTTGGATCCATGGTTGGGTGCCTTAAGAATGCACTGGCTCAGGCTCTGGTTCCCTATTATGTCTTGGCTGGTGAGGTGGTGCAAAACTCCATGGCTGAACCTGAGATTCTTTGCAATAACCGTGGGGTTTGTTTTATTGAGGCTGAGGCTGATGTTGAGCTTCATAGTCTGAATTTGTACAATCCTGATGAATCCATTGAAGGCAAGTTTGTTCCAAACAAGAAACACGGCATTCTTGCTGTTCAGGCAACTTCACTAAAGTGCGGTGGATTAGTAGTAGCATGCAGTTTTGACCACCGCATCGCAGATGCTTACAGTGCAAACATGTTCCTCATATCATGGGCCCAACTAGCCCAGCCCATAAAGCCCACCACCTTAACCCATCAACCTTGTTTTCGTCGCTCCCTCCTGAGCCCACGACGCCCACCACCATCAATCCACCCTTCAATTGACCACATGTATATTCCCTACACGGATCTCCCTCCTCCACTTGAGCCCGAGCCTGAGACCAAGCCTGATGATCCCAGCCCGGTTATCAGCCGGATATACTATGTTACCCTTGAACAACTCAACCACATACAGTCCCTTGCAACCTCAAAAAATGGTGCTAAGCCCACAAAACTAGAGACTATGTCAGCGTTTTTGTGGAAGTTGGTAGCCTCAGCCTCCGAAACTGTTTATG 859 0.468 MGVENNNNGEFKVKVTKEDVVVAAMLPMQDHWLPLSNLDLLLPPLDFGVFFCYHNTTMSFGSMVGCLKNALAQALVPYYVLAGEVVQNSMAEPEILCNNRGVCFIEAEADVELHSLNLYNPDESIEGKFVPNKKHGILAVQATSLKCGGLVVACSFDHRIADAYSANMFLISWAQLAQPIKPTTLTHQPCFRRSLLSPRRPPPSIHPSIDHMYIPYTDLPPPLEPEPETKPDDPSPVISRIYYVTLEQLNHIQSLATSKNGAKPTKLETMSAFLWKLVASASETVY 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272560g00004 286 Gene3D - 11 213 IPR023213 -
Stsc272560g00004 286 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 27 281 - -
Stsc272560g00004 286 Pfam Transferase family 12 283 - -
Stsc272560g00004 286 Gene3D - 217 285 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272560g00004 Stsc-Chr272560 28323 29985 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272560g00004 23 281 Monolignol Biosynthesis Gene Families AT5G48930 26.866 7.09e-23 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272560g00004 - - ahf:112746934 350.132