Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272560g00002 ATGGGTGGTAATGGAAAAGGAGAATTACTATCGTTCAAAGTAAGGGTGACGAATGAGGAGGTTATTGCGGCTGTTTTGCCAACGCAAGACCATTGGCTGCCATTCTCAAACCTTGACCTCCTTCTTCCTCCGATCGATGCCAGCGTCTTCTTTTGCTACAATAATAACACTGAAGAAATGCTGAGCTTTGAATCAATGGTGGGAACACTTAAGAATTCACTAGCTCAGGCACTGGTTCCCTATTATGTCTTGGCTGGTGAGGTGGTGCAAAACTCCATGGGAGAACCTGAGCTTCATTGCAATAACCGTGGGGTTGAATTCATTGAGGCTGAGGCTGATGTTGAACTTCGTAGTCTGAATTTGTATAATCCTGATGAATCCATTGAAGGCAAACTTGTTCCCAAGAAGAAGCATGGCGTCCTTGCTGTTCAGGCATGCATAGCAACTTGGTTAAAGTGTGGTGGGTTAGTAATAGCATGTACTACGGACCATCGCCTTATTGATGCTTACGGTGTAAAAATGTTCCTCGTATCATGGGCCCAGTTAGCCCAATCCACAAAGCCTATCATGCTAACCCATCAACCTTGCTGTCGCCGGTCCCTCCTAAGCCCAAGACGGCCCCCCTCAGCCCACCCTTCAATTGACCGCACTTATGTTCTCCTCAGCGACTTGCCTCCTCCACCACCTGAGCCCAAGCCCGACCCCCTGTCAGGCCCAAACATTAGCCGCATATACTACGTCACTATTGAAGAACTTAACCGCATACAAGCACTTGCAAGCTCAACCGAATTCAAGCCCACGAAGTTCGTGTCCTTGTCTGCATTCTTGTGGAAGATGGTTGCTACGGCTTCTTCTGCTTCCTCTTCCTCCAATGCTGTTGTTGATGGTTGTAATAAGAAAAGAGGCATTGTTGCAAAGATGGGTATTGCGGTTGATGGAAGAACAAGGCTGAGCAATGGTGACAAGAAGAAGGAAGCACTCATGAATTCTTACTTTGGCAACGTGGTTTCCATTCCATTTGAAGGGGAAGAAGTGGGGAAGCTAATAGAAAAACCGTTAACCCTGGCAGCAGAGCAGGTTCGCGAGTTCTTAGAGGTGGCAACAACGGAGGAGCATTTCTTAGGGCTCATTGACTGGGTGGAAGTACACCGTCCCACGCCTGCGGTGGCGAGGATTTCCTGTGAAACAAACGACGGGCCATGTTTTGTGGTGTCTTCTGGACGAAGGTTTCTTGAGTCAAACGTTGACTTCGGTTGGGGAAAGCCTGTGTTTGGATCATGCCACTGTCCATGGAAAGGTGGTTGTGGGTATGTGATGCCATTTCCTAGCCCTAAAGGGAATGGTGATTGGGTGATCTTCATGAACCTTCAGAAGAATTTATTGGAATTCATGGAATCTCATTTCCCTCATATCTTTAGACCCTTATCTTGGGATTACCTTACCAACAAAATATGA 1455 0.4715 MGGNGKGELLSFKVRVTNEEVIAAVLPTQDHWLPFSNLDLLLPPIDASVFFCYNNNTEEMLSFESMVGTLKNSLAQALVPYYVLAGEVVQNSMGEPELHCNNRGVEFIEAEADVELRSLNLYNPDESIEGKLVPKKKHGVLAVQACIATWLKCGGLVIACTTDHRLIDAYGVKMFLVSWAQLAQSTKPIMLTHQPCCRRSLLSPRRPPSAHPSIDRTYVLLSDLPPPPPEPKPDPLSGPNISRIYYVTIEELNRIQALASSTEFKPTKFVSLSAFLWKMVATASSASSSSNAVVDGCNKKRGIVAKMGIAVDGRTRLSNGDKKKEALMNSYFGNVVSIPFEGEEVGKLIEKPLTLAAEQVREFLEVATTEEHFLGLIDWVEVHRPTPAVARISCETNDGPCFVVSSGRRFLESNVDFGWGKPVFGSCHCPWKGGCGYVMPFPSPKGNGDWVIFMNLQKNLLEFMESHFPHIFRPLSWDYLTNKI 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272560g00002 484 Pfam Transferase family 12 469 - -
Stsc272560g00002 484 Gene3D - 8 217 IPR023213 -
Stsc272560g00002 484 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 25 443 - -
Stsc272560g00002 484 Gene3D - 227 469 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272560g00002 Stsc-Chr272560 8229 10985 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272560g00002 36 465 Monolignol Biosynthesis Gene Families AT5G48930 26.966 3.33e-34 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272560g00002 - - ahf:112746934 699.123