Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272544g00001 ATGAGAGCTATTTCCAAAACAAGCACCACCACCACTACTACTACATTAGCACCTATGGCAACACTAACAAAAATGGGTAACACTAATATTCACTCTCACTCATCACCATGGCACACACCAATTCCTTATCTCTTTGGAGGCCTTGCTGCCATGTTAGGCCTCATAGCCTTTGCTCTATTGATGCTTGCTTGTTCTTATTATTGGAAACTCTTTGTTCAACTCCAAAATCGACAACAAAATGGTGACAACAATAGTAACAACGTTGGAGACTTGGAGAAAGATTGTGATGAAACTCAAAGGAATGAGCCCTTTAAGGCCTATGAAGAGAAGGTGTTGGTAATCATGGCTGGCAATGAAAAACCAACATTCTTGGCCACCCCTGTTTTTCCAAACTATGGAAAACAACTTATTTGTCAAGATTGTGGCTCAATGATTGAAGATTCTGAGGTTTCTAATAATGAAGAAGTGTCTGAAAAAGACATCATCAACAAGGACAACGTTGTTGTCCATATTGCTGCTGCTGCTACGACTCTGTCACAAGAGAATCAAGATTCACAACAAAACCAAGAGCAAGAACAAGAAGAAAATCAGTGA 594 0.3973 MRAISKTSTTTTTTTLAPMATLTKMGNTNIHSHSSPWHTPIPYLFGGLAAMLGLIAFALLMLACSYYWKLFVQLQNRQQNGDNNSNNVGDLEKDCDETQRNEPFKAYEEKVLVIMAGNEKPTFLATPVFPNYGKQLICQDCGSMIEDSEVSNNEEVSEKDIINKDNVVVHIAAAATTLSQENQDSQQNQEQEQEENQ 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272544g00001 197 Coils Coil 175 195 - -
Stsc272544g00001 197 PANTHER PROTEIN GLUTAMINE DUMPER 4-RELATED 8 193 IPR040359 GO:0080143
Stsc272544g00001 197 MobiDBLite consensus disorder prediction 175 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272544g00001 Stsc-Chr272544 16578 17454 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272544g00001 35 127 Glutamine Dumper (GDU) Family AT5G57685 56.989 2.21e-29 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272544g00001 - - aip:107605457 238.81