Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272525g00002 ACTGGAAAATCATCAGAGAAGACTGATGTGTTTGGGTATGGTATAACACTTCTCGAATTAGTCACCGGTCAACGCGCCGTTGACTTATTTCGGCTTCAAGAGGAGGAGGAGGATGTTCTTCTGCTTGATCATATAAAGAAGCTGTTGAAGGAAGACAGGTTGAAGGACATAGTAGATAGAAACCTAGAGACATATGATGAAAAGGAAGTAGAGAGAATAATTCATGTTGCATTGTTTTGCACAAGAAACTACCCAGAGGAGCGTCCAACAATGTCAGAGATAGTGAAAATGCTTCAAGGGGTTGGTTTGCAAGAGAGATGGAATGAATTGGAGCAACGTAGTAATGAAGAAGAGAGAAATTGCATGCATTGTGGTTTCTGA 381 0.4094 TGKSSEKTDVFGYGITLLELVTGQRAVDLFRLQEEEEDVLLLDHIKKLLKEDRLKDIVDRNLETYDEKEVERIIHVALFCTRNYPEERPTMSEIVKMLQGVGLQERWNELEQRSNEEERNCMHCGF 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272525g00002 126 SUPERFAMILY Protein kinase-like (PK-like) 3 104 IPR011009 -
Stsc272525g00002 126 Gene3D Transferase(Phosphotransferase) domain 1 1 118 - -
Stsc272525g00002 126 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 2 101 - -
Stsc272525g00002 126 Pfam Protein tyrosine and serine/threonine kinase 3 98 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272525g00002 Stsc-Chr272525 1 1396 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272525g00002 1 111 Receptor kinase-like Gene Family AT5G65240 69.643 1.68e-43 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Stsc272525g00002 PK_Tyr_Ser-Thr 2.8e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272525g00002 - - pcin:129307818 174.866