Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272514g00003 ATGGAGTCTATGTGGTTATTATCATCAACCACTACCACAGCATTGCTTCTGTTTCTGCTCTCTTGCTTCACATTCACTTCTACAGATGCCTATGATGCACTTGATCCAACCGGCAACATAACAATCAAATGGGATGTCATTAGCTGGACCCCAGATGGCTATGTTTACCGGCACATTCAGGCGCCGGGGTGGTCGTTAGGGTGGTCATGGGCCAAGAAAGAAGTAATATGGAACATGATGGGAGGACAAACCACAGAGCAAGGAGATTGCTCAAAGTTCAAAGCAGGCCAACCACATTGCTGTAAAAAGGATCCTTTGGTTGTTGACTTGCTTCCGGGGACTCCTTACAACCAACAAATCGCGAATTGCTGCAAAGGCGGTGTCCTCAGCTCCTGGGCTCAGGACCCCGCTAATGCTGTTAGCTCGTTCCAGCTCAGCGTCGGCTCGGCTGGAACAACTAACAGAACTGTCAAGTTGCCGCGAAACTTCACCCTCAAGGCACCTGGTCCTGGATACACTTGTGGCCCTGCAAAGATTGTTAGGCCAACTAAATTTGTTACTAATGACAAAAGAAGAACCACCCAAGCCTTAATGACTTGGAATGTTACCTGCACTTACTCTCAATTCCTGGCTCAAAAGACACCAACTTGTTGTGTTTCACTCTCATCCTTCTACAATGACACAATAGTTAACTGTCCAACTTGCACCTGCGGCTGCCGGAACAGAACCGCCCCGGGAAGCTGTGTAGATCCAGACTCTACACATTTAGCTTCAGTTGTGTCAGGGAAGCCGACCGATTCGCCTCTAGTCCAATGCAGCAGCCACATGTGTCCGATTCGAGTGCATTGGCACGTCAAGCTAAATTACAAAGAGTACTGGAGGATCAAGATCACAATAACAAATTTCAACTACAGAATGAACTACACTCAATGGAACCTTGTGGTTCAGCACCCGAATTTCGATAATCTAACTGACAACTTCAGCTTTAATTACAAGCCTCTAATGCCTTACGAAGGCTTAAATGATACTGCTATGCTATGGGGAGTGAAGTTCTACAATGATTTTCTATCTTCAGCTGGACCACTTGGAAATGTGCAATCAGAACTCTTGTTTAAGAAGGACAAAGAAACCTTCACTTTTGATAAGGGTTGGGCTTTCCCAAGAAGAATCTATTTCAATGGAGATAACTGTGTTATGCCTCCTCCTGATGCATATCCTTGGCTTCCAAATTCAACTTCAAGAACACAAGTTTTCTCTTCACTAGCCACTCTCATCATAGCCATTTTAGCTTCTCTAATCTCACTGATTAATTAA 1314 0.4498 MESMWLLSSTTTTALLLFLLSCFTFTSTDAYDALDPTGNITIKWDVISWTPDGYVYRHIQAPGWSLGWSWAKKEVIWNMMGGQTTEQGDCSKFKAGQPHCCKKDPLVVDLLPGTPYNQQIANCCKGGVLSSWAQDPANAVSSFQLSVGSAGTTNRTVKLPRNFTLKAPGPGYTCGPAKIVRPTKFVTNDKRRTTQALMTWNVTCTYSQFLAQKTPTCCVSLSSFYNDTIVNCPTCTCGCRNRTAPGSCVDPDSTHLASVVSGKPTDSPLVQCSSHMCPIRVHWHVKLNYKEYWRIKITITNFNYRMNYTQWNLVVQHPNFDNLTDNFSFNYKPLMPYEGLNDTAMLWGVKFYNDFLSSAGPLGNVQSELLFKKDKETFTFDKGWAFPRRIYFNGDNCVMPPPDAYPWLPNSTSRTQVFSSLATLIIAILASLISLIN 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272514g00003 437 PANTHER PROTEIN COBRA 20 424 IPR006918 GO:0010215|GO:0016020
Stsc272514g00003 437 PIRSF COBRA 3 437 IPR006918 GO:0010215|GO:0016020
Stsc272514g00003 437 Pfam COBRA-like protein 55 207 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272514g00003 Stsc-Chr272514 10011 12495 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272514g00003 16 429 COBRA Gene Family AT3G02210 71.860 0.0 674
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272514g00003 - - gmx:100815779 757.288