Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272514g00002 ATGGAATTTGATAATGGTGGCAAGCTCATCAAGTTGGTTACCTTGGCTGCTATATGCTTCATGATACTTTCACAAGCAGATGCATTTGATCCATTGGATCCAACTGGGAATGTGACAATAAGATGGGATATCATGTCTTGGACATCAGATGGCTACATGGCCACAGTGACAGTGCTAAACTTTCAACAATATAGGACAATCATGAACCCTGGATGGACAATAGGGTGGACATGGGCAAAGAAAGAGATAATATGGGCAATGATGGGAGCTCAAGCAACTGAGCAAGGTGATTGTGCCAAATTCAAGTTGAAGATTCCTCACAGTTGCAAGAGGAACCCTCAGGTTGTTGACTTAATGCCTGGTGCACCTTTCAACATGCAATATAATAACTGCTGCAAAGGTGGTGTCCTGACTTCTTGGGGTCAGGACCCAGCCGGCGCCGTCTCGGCTTTCCAGATAGGTGTAGGCCTATCTGGAACCTCTAACAAGACGGTTAAGCTTCCCAAGAACTTCAAGCTTCTCGTGTCTTGGAATGTGACATGTACTTATTCACAATTTCTAGCCTCCAAGAACCCAAGTTGTTGTGTTTCTTTGTCATCTTTCTACAATGACAAAGTCACACCTTGCCCAACTTGTGCTTGTGGTTGTCAAAACAATGGAACCTGCGTCACGAAGGAGTCAAAGTTACTACAAGAACAAGCAGATGAGAGAATAAAGACTAAGAAGAGTGATATGACACCAAAGCCATTGTTACAATGCACACACCACCTTTGTCATGTGAGGGTTCATTGGCACATCAAAGACAACTACCAAGATTATTGGAGGGTCAAGATTGCCATCATCAACTTCGATTTTCGACTCAATTACACCTTGTGGAACCTTGTCATCCAACATCCCAATCTCAACAATGTCACACAAGTCTATAGCTTTGAATACATGCCACTTCTTCCCTATGAAGCCATAAATGACACAGGAATGTTCTATGGTTTGAAGTATTACAATGATCTATTGATGGAAAATGGGCCTAAAGGGAATGTGCAATCTGAGATTCTTATGAAGAAAGACAAGAACACATTCACACTCAAGAATGGATGGGCTTTTCCAAGGAGAGTCTACTTCAATGGTGAAGAATGCATGCTGCCACCTCCTGATTCATACCCTTTCTTGCCAAACTCTGCTCATAGGCTACCGATTCGCGCTTCGTCGATAGCCTCCGGCGCCATTTTCGCTTTGTTTTTTCATTTGGTTTTGATACTTTTGTGA 1263 0.4291 MEFDNGGKLIKLVTLAAICFMILSQADAFDPLDPTGNVTIRWDIMSWTSDGYMATVTVLNFQQYRTIMNPGWTIGWTWAKKEIIWAMMGAQATEQGDCAKFKLKIPHSCKRNPQVVDLMPGAPFNMQYNNCCKGGVLTSWGQDPAGAVSAFQIGVGLSGTSNKTVKLPKNFKLLVSWNVTCTYSQFLASKNPSCCVSLSSFYNDKVTPCPTCACGCQNNGTCVTKESKLLQEQADERIKTKKSDMTPKPLLQCTHHLCHVRVHWHIKDNYQDYWRVKIAIINFDFRLNYTLWNLVIQHPNLNNVTQVYSFEYMPLLPYEAINDTGMFYGLKYYNDLLMENGPKGNVQSEILMKKDKNTFTLKNGWAFPRRVYFNGEECMLPPPDSYPFLPNSAHRLPIRASSIASGAIFALFFHLVLILL 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272514g00002 420 PIRSF COBRA 6 176 IPR006918 GO:0010215|GO:0016020
Stsc272514g00002 420 PIRSF COBRA 172 419 IPR006918 GO:0010215|GO:0016020
Stsc272514g00002 420 PANTHER PROTEIN COBRA 175 403 IPR006918 GO:0010215|GO:0016020
Stsc272514g00002 420 Pfam COBRA-like protein 52 182 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272514g00002 Stsc-Chr272514 7308 9835 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272514g00002 3 420 COBRA Gene Family AT3G02210 52.876 0.0 514
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272514g00002 - - zju:107419025 620.928