Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272511g00003 ATGGCATCATCAACATTGCCATCTTCTCTATTCCTCCAACTTGATTTCCCATCAACAAGATTCTCCTCAGCTACATCCTCCAACAAACTCTCCCTTTCATCAAACTCAAACTCAAACTCAAACCGCTCCTCCTCCTTCCATGTACTTCCAATCCGGGCTTCTGTGTCCGAGAGGCCGACGACACCACCCGTGTCGACCTCTCAGACACTTCAGCCCGGACCGAATGAACCAACCGGCGGTACTAATAATCTACCGATGAGAAAGATCCCGGGCGATCTCGGGATCCCAATCATCGGTGCGTTAAAAGACCGTCAGGATTACTTCTACAACCAAGGCAAGGATGAGTTTTTCAAATCAAGAATCCAAAAATACCAGTCAACCGTTTTCCGCGCCAACATGCCACCTGGACCGTTCATCGCAAACTCACCAAACGTCGTCGCTTTGCTCGACGCCAAGTCTTTCCCCACGCTTTTCGACGTCTCGAAAGTCGAAAAGCGTGACGTGTTCACCGGAACATACATGCCGTCGACGGAGCTCACCGGCGGTTACAGAGTCCTCTCTTACCTGGATCCTTCGGAAGCCAAACACGGCCTTCTGAAACGGTTAATGTTCTTTCTCTTGAAATCTCGCCGCGAATACGTGATCCCTGAGTTCCGTTCGAGCTACACGGAGTTCTTCGAGTCATTGGAATCCGAGCTTTCTGAGAAAGGAAAAGCCGATTTTGCCCTCGCCAACGATCAAGCAGCTTTTAACTTCTTGGCGCGATCGCTCTTCGATTCGAACCCTCGCGACACCGAACTCGGTACGGACGGGCCAGGAATCGTCCAGAAGTGGGTTCTGTTTCAACTCAGTCCGATTCTCCGACTCGGTCTACCTCAGTTCATCGAAGATTCGGTCTTCCACAGCGTCCGCCTTCCGCCGAAGCTGATCATGAAGCAGTACCAGAGGCTCTACGATTTCTTCTACCAGTCTTCGGGATTCGTGCTGGACGAAGGTGAGAGATTGGGAATCTCGAGGGAGGAAGCGTGCCATAACCTAGTTTTCGCGACGTGCTTCAATTCGTTCGGAGGGATGAAGCTGTTCTTCCCGAACGTGATGAAGTGGATCGGGAGAGCGGGGGTGAATTTGCACGCGCGGCTTGCGGCGGAGATTAGGGCGGCGGTGAAGGAGGCCGGTGGAGAGGTTACGATGGCGGCGATGGAGAAGATGGAGTTGATGAAGTCGGTGGTTTATGAGGCGTTTAGGATTGACCCGCCAGTGCCGTTGCAGTATGGGAAAGCCAAAAGGGACTTAATCATTGAAAGCCATGAACATGCTTTTCAGGTGAAAGCAGGAGAAATGCTATTTGGGTACCAACCATTTGCAACCAAAGACCCAAAGATTTTCGACAGAGCTGATGAATTTGTTGGGGACAGGTTCATGGGAGAGGAAGGAGAGAAGCTATTGAAGTATGTTATTTGGTCGAATGGTCCTGAGACTGAAAACCCCACTGTTTCTAACAAGCAATGTGCTGGGAAGGATTTTGTTATGCTGTTTTCAAGGCTTCTTGTTGTTGAACTCTTCCTTCGTTATGATTCCTTTGAGATTCAAGTTGGAACTTCACCCTTAGGCTCTAAGATTACCCTCACTTCTCTTAAGAGAGCTAGCTTTTAA 1653 0.4991 MASSTLPSSLFLQLDFPSTRFSSATSSNKLSLSSNSNSNSNRSSSFHVLPIRASVSERPTTPPVSTSQTLQPGPNEPTGGTNNLPMRKIPGDLGIPIIGALKDRQDYFYNQGKDEFFKSRIQKYQSTVFRANMPPGPFIANSPNVVALLDAKSFPTLFDVSKVEKRDVFTGTYMPSTELTGGYRVLSYLDPSEAKHGLLKRLMFFLLKSRREYVIPEFRSSYTEFFESLESELSEKGKADFALANDQAAFNFLARSLFDSNPRDTELGTDGPGIVQKWVLFQLSPILRLGLPQFIEDSVFHSVRLPPKLIMKQYQRLYDFFYQSSGFVLDEGERLGISREEACHNLVFATCFNSFGGMKLFFPNVMKWIGRAGVNLHARLAAEIRAAVKEAGGEVTMAAMEKMELMKSVVYEAFRIDPPVPLQYGKAKRDLIIESHEHAFQVKAGEMLFGYQPFATKDPKIFDRADEFVGDRFMGEEGEKLLKYVIWSNGPETENPTVSNKQCAGKDFVMLFSRLLVVELFLRYDSFEIQVGTSPLGSKITLTSLKRASF 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272511g00003 550 Gene3D Cytochrome P450 84 550 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272511g00003 550 MobiDBLite consensus disorder prediction 58 82 - -
Stsc272511g00003 550 FunFam Allene oxide synthase, chloroplastic 84 550 - -
Stsc272511g00003 550 SUPERFAMILY Cytochrome P450 85 535 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272511g00003 550 MobiDBLite consensus disorder prediction 25 44 - -
Stsc272511g00003 550 CDD CYP74 118 543 - -
Stsc272511g00003 550 PANTHER CYTOCHROME P450 26 84 524 - -
Stsc272511g00003 550 MobiDBLite consensus disorder prediction 54 84 - -
Stsc272511g00003 550 Pfam Cytochrome P450 377 525 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272511g00003 Stsc-Chr272511 29448 32224 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272511g00003 24 550 Cytochrome P450 AT5G42650 61.815 0.0 672
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272511g00003 K01723 - gmx:100037481 796.964